Protein–RNA interactions for Protein: Q2UY09

COL28A1, Collagen alpha-1(XXVIII) chain, humanhuman

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1Q2UY09 AC131392.1-201ENST00000506490 633 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC130365.2-201ENST00000525882 1201 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 ZNF322P1-201ENST00000568013 1209 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 MIR3908-201ENST00000579798 126 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC073046.2-201ENST00000604756 527 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 MRPL57P1-201ENST00000621486 265 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC020923.1-201ENST00000624021 917 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC021766.1-201ENST00000624404 741 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 AC120036.2-201ENST00000509729 1474 ntBASIC5.96□□□□□ -1.46
COL28A1Q2UY09 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL28A1Q2UY09 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 ICE2P1-201ENST00000512800 1849 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 RNU6-883P-201ENST00000384597 107 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 FABP12P1-201ENST00000401911 322 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL023284.3-201ENST00000407767 334 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 MIR1203-201ENST00000408812 85 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 RPA2P2-201ENST00000419698 796 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL035660.1-201ENST00000422041 222 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 ZNF101P1-201ENST00000435701 1720 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 PCBP2P1-201ENST00000437262 977 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 RAB9AP5-201ENST00000437794 597 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 RAB9AP2-201ENST00000443911 597 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL133351.3-201ENST00000454998 193 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 OR7E10P-201ENST00000526420 991 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC090236.2-201ENST00000587933 1101 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC018690.1-201ENST00000608144 626 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 MIR7155-201ENST00000615925 56 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC005899.7-201ENST00000618199 588 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC005332.9-201ENST00000620266 2921 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL356094.1-201ENST00000624663 1212 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 AL078595.2-201ENST00000605309 1780 ntBASIC5.95□□□□□ -1.46
COL28A1Q2UY09 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.95□□□□□ -1.46
COL28A1Q2UY09 MRRFP1-201ENST00000435941 1675 ntBASIC5.94□□□□□ -1.46
COL28A1Q2UY09 AC074141.1-201ENST00000588129 2995 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms