Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 CDY11P-201ENST00000447168 1651 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDH1Q08174 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 MFSD8-217ENST00000641178 4374 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC087392.3-202ENST00000358446 1754 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC005614.1-201ENST00000598952 3653 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 RNY4P24-201ENST00000362735 96 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 Y_RNA.390-201ENST00000383932 102 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 SNORD15A-201ENST00000384214 148 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PCDH1Q08174 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 HMGB3P18-201ENST00000406327 590 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 BTF3P7-201ENST00000407097 488 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 RNA5SP80-201ENST00000410475 111 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 FTOP1-201ENST00000419363 861 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 NANOGP4-201ENST00000427230 913 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDH1Q08174 YWHAEP5-201ENST00000431545 765 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC008072.1-201ENST00000434254 824 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 YWHAZP2-201ENST00000440317 728 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 DEFA11P-201ENST00000446470 261 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 MTND2P24-201ENST00000453434 806 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 RPL7P17-201ENST00000470927 724 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC072039.1-201ENST00000477611 581 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC008040.4-201ENST00000494834 768 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 ARL2BPP4-201ENST00000506854 471 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC090071.1-201ENST00000507713 644 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC093281.2-201ENST00000510153 597 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC116347.2-201ENST00000514912 523 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 RNU6-1334P-201ENST00000516032 105 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC113191.1-201ENST00000517759 403 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDH1Q08174 RBMS2P1-201ENST00000525031 1226 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 BCAS2P1-201ENST00000528022 632 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 MED28P5-201ENST00000528254 438 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 YWHABP2-201ENST00000540201 713 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 EEF1B2P1-201ENST00000567221 672 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 BOLA2P1-201ENST00000584794 232 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 NDUFA3P1-201ENST00000588007 252 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC119501.1-201ENST00000603646 475 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC068276.1-201ENST00000605793 379 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC104117.5-201ENST00000606195 547 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 MIR6736-201ENST00000616799 59 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC005840.5-201ENST00000619166 599 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC011815.3-201ENST00000624194 473 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AL132796.3-201ENST00000624703 900 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 OR5AK4P-201ENST00000635912 903 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AL353743.4-201ENST00000422653 1547 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms