Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.72□□□□□ -1.33
GABPAQ06546 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GABPAQ06546 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GABPAQ06546 AL390318.1-201ENST00000624564 687 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.72□□□□□ -1.33
GABPAQ06546 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
GABPAQ06546 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
GABPAQ06546 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
GABPAQ06546 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.71□□□□□ -1.33
GABPAQ06546 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.71□□□□□ -1.33
GABPAQ06546 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
GABPAQ06546 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
GABPAQ06546 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
GABPAQ06546 AL162456.1-201ENST00000634535 2006 ntBASIC6.71□□□□□ -1.33
GABPAQ06546 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 MIR1178-201ENST00000408396 91 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.71□□□□□ -1.34
GABPAQ06546 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.71□□□□□ -1.34
GABPAQ06546 SPRYD7P1-201ENST00000443861 570 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 AP000547.1-201ENST00000454360 617 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 RN7SL629P-201ENST00000489622 285 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 FTH1P8-201ENST00000498161 514 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.71□□□□□ -1.34
GABPAQ06546 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.71□□□□□ -1.34
GABPAQ06546 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 DPPA3P2-202ENST00000557188 1219 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 AC015720.2-201ENST00000567709 334 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC069234.4-201ENST00000621276 412 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
GABPAQ06546 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 Z83820.1-201ENST00000456978 1499 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
GABPAQ06546 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.71□□□□□ -1.34
GABPAQ06546 AC022164.1-201ENST00000568767 2673 ntBASIC6.71□□□□□ -1.34
GABPAQ06546 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
GABPAQ06546 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GABPAQ06546 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.7□□□□□ -1.34
GABPAQ06546 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.7□□□□□ -1.34
GABPAQ06546 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
GABPAQ06546 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.7□□□□□ -1.34
GABPAQ06546 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
GABPAQ06546 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.7□□□□□ -1.34
GABPAQ06546 NPM1P4-201ENST00000414095 812 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 USP24P1-201ENST00000433802 779 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 RPS3AP38-201ENST00000435889 763 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 AC006335.2-201ENST00000437993 330 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 COPS8P2-201ENST00000473228 627 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 AC074386.1-201ENST00000476560 767 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 SIAH1P1-201ENST00000479411 923 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 DUTP1-201ENST00000493631 470 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 IGLV3-24-201ENST00000517477 197 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.7□□□□□ -1.34
GABPAQ06546 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.7□□□□□ -1.34
GABPAQ06546 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.7□□□□□ -1.34
GABPAQ06546 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC007448.1-201ENST00000582714 234 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 IMMP1LP3-201ENST00000604197 224 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 PPATP2-201ENST00000605635 508 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC090607.5-201ENST00000615692 224 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
GABPAQ06546 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
GABPAQ06546 AC025470.1-201ENST00000510053 2032 ntBASIC6.7□□□□□ -1.34
GABPAQ06546 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GABPAQ06546 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms