Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 C4BPAP1-201ENST00000415474 1893 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 LINC01616-201ENST00000561816 2280 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNA1P78396 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNA1P78396 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 SNORD8-201ENST00000363915 110 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNA1P78396 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCNA1P78396 SNORA70-201ENST00000384436 135 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCNA1P78396 GAPDHP42-201ENST00000406848 981 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 RN7SKP151-201ENST00000410230 316 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.66□□□□□ -1.34
CCNA1P78396 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNA1P78396 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNA1P78396 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNA1P78396 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.66□□□□□ -1.34
CCNA1P78396 AL390119.1-201ENST00000440329 312 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 CYCSP51-201ENST00000443545 318 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNA1P78396 RPL7P39-201ENST00000481157 744 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 RPL32P9-201ENST00000487963 407 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 RN7SL547P-201ENST00000490793 290 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.66□□□□□ -1.34
CCNA1P78396 OR10G5P-201ENST00000532733 358 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.66□□□□□ -1.34
CCNA1P78396 AC004825.1-201ENST00000555068 586 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 FKBP1AP1-201ENST00000594588 318 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 AC008115.4-201ENST00000619780 775 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 MIR8080-201ENST00000622224 89 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.66□□□□□ -1.34
CCNA1P78396 DNM1P47-203ENST00000571780 12667 ntBASIC6.66□□□□□ -1.34
CCNA1P78396 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CCNA1P78396 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCNA1P78396 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCNA1P78396 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 NCOA4P2-201ENST00000340589 1813 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 OLMALINC-203ENST00000641087 3779 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCNA1P78396 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 AC007562.1-201ENST00000421819 517 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 AC007394.1-201ENST00000421941 531 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCNA1P78396 GAPDHP58-201ENST00000438477 1006 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 AC023274.2-201ENST00000445264 521 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 AL022319.1-201ENST00000458183 1167 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 AL157777.1-201ENST00000468100 304 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 RPL32P33-201ENST00000487023 394 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 EIF1P7-201ENST00000487533 337 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 COX6B1P2-201ENST00000489624 230 ntBASIC6.65□□□□□ -1.34
CCNA1P78396 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.65□□□□□ -1.34
CCNA1P78396 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.65□□□□□ -1.34
CCNA1P78396 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CCNA1P78396 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.65□□□□□ -1.35
CCNA1P78396 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCNA1P78396 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCNA1P78396 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.65□□□□□ -1.35
CCNA1P78396 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.65□□□□□ -1.35
CCNA1P78396 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCNA1P78396 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.65□□□□□ -1.35
CCNA1P78396 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CCNA1P78396 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCNA1P78396 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.64□□□□□ -1.35
CCNA1P78396 MRE11P1-201ENST00000464884 2127 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 RNA5SP319-201ENST00000362768 119 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.64□□□□□ -1.35
CCNA1P78396 RNU6-171P-201ENST00000384354 107 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms