Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 MTCO1P21-201ENST00000416634 589 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC007365.2-201ENST00000428806 458 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 GTF3AP5-201ENST00000442645 697 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 RN7SKP198-201ENST00000459286 306 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 CCDC11P1-201ENST00000503137 1162 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 DSTNP2-201ENST00000504533 515 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 WBP1LP4-201ENST00000505043 344 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AF213884.2-201ENST00000510417 903 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 OR10J9P-201ENST00000511932 987 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.32□□□□□ -1.4
GFRA1P56159 OR5D2P-201ENST00000524390 911 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AP001317.1-201ENST00000531194 960 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 PHBP2-201ENST00000532859 806 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.32□□□□□ -1.4
GFRA1P56159 BLZF2P-201ENST00000553776 1130 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC026458.1-201ENST00000564330 438 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 ACTG1P15-201ENST00000570019 1063 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.32□□□□□ -1.4
GFRA1P56159 AC011447.2-201ENST00000592921 283 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC009220.3-201ENST00000604318 586 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GFRA1P56159 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 U6.107-201ENST00000637108 79 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AL596275.2-203ENST00000641951 371 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 AC100871.1-201ENST00000507871 1456 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GFRA1P56159 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 EPS15P1-202ENST00000459691 2071 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
GFRA1P56159 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 HSPD1P1-201ENST00000503199 1726 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.31□□□□□ -1.4
GFRA1P56159 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
GFRA1P56159 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.31□□□□□ -1.4
GFRA1P56159 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.31□□□□□ -1.4
GFRA1P56159 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GFRA1P56159 AL031577.2-201ENST00000404133 280 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 AL390774.1-201ENST00000411924 246 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 NRBF2P2-201ENST00000413087 861 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 AC244452.1-201ENST00000413798 141 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.31□□□□□ -1.4
GFRA1P56159 AC066692.1-201ENST00000421721 457 ntBASIC6.31□□□□□ -1.4
GFRA1P56159 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.31□□□□□ -1.4
GFRA1P56159 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.31□□□□□ -1.4
GFRA1P56159 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.31□□□□□ -1.4
GFRA1P56159 AC018804.1-201ENST00000430381 618 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms