Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 EIF3EP1-201ENST00000433978 1316 ntBASIC5.58□□□□□ -1.52
CDH12P55289 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 SNORA63.3-201ENST00000362682 132 ntBASIC5.58□□□□□ -1.52
CDH12P55289 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 TRIM60P17-201ENST00000415181 719 ntBASIC5.58□□□□□ -1.52
CDH12P55289 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.58□□□□□ -1.52
CDH12P55289 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH12P55289 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH12P55289 AC108751.3-201ENST00000461814 1020 ntBASIC5.58□□□□□ -1.52
CDH12P55289 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 AC113191.1-201ENST00000517759 403 ntBASIC5.58□□□□□ -1.52
CDH12P55289 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 AC113192.3-201ENST00000529152 742 ntBASIC5.58□□□□□ -1.52
CDH12P55289 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 KATNBL1P5-201ENST00000605015 517 ntBASIC5.58□□□□□ -1.52
CDH12P55289 AC135178.6-201ENST00000605314 398 ntBASIC5.58□□□□□ -1.52
CDH12P55289 OR51C1P-201ENST00000608504 942 ntBASIC5.58□□□□□ -1.52
CDH12P55289 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH12P55289 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.58□□□□□ -1.52
CDH12P55289 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
CDH12P55289 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDH12P55289 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH12P55289 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CDH12P55289 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 AC140134.1-201ENST00000511830 3544 ntBASIC5.57□□□□□ -1.52
CDH12P55289 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 RN7SKP128-201ENST00000364270 303 ntBASIC5.57□□□□□ -1.52
CDH12P55289 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH12P55289 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.57□□□□□ -1.52
CDH12P55289 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH12P55289 NME1P1-201ENST00000420914 382 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 MTND4P24-201ENST00000424002 397 ntBASIC5.57□□□□□ -1.52
CDH12P55289 RNF19BPX-201ENST00000426224 625 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 MTCO1P45-201ENST00000431457 267 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AL645936.1-201ENST00000441979 518 ntBASIC5.57□□□□□ -1.52
CDH12P55289 XKRY2-201ENST00000442362 1093 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AL512593.1-201ENST00000444758 779 ntBASIC5.57□□□□□ -1.52
CDH12P55289 RPS18P1-201ENST00000447840 458 ntBASIC5.57□□□□□ -1.52
CDH12P55289 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 EIF2S2P5-201ENST00000457635 968 ntBASIC5.57□□□□□ -1.52
CDH12P55289 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 AC108729.2-201ENST00000476543 840 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC090543.1-201ENST00000492168 485 ntBASIC5.57□□□□□ -1.52
CDH12P55289 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH12P55289 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 AC095052.1-201ENST00000509955 863 ntBASIC5.57□□□□□ -1.52
CDH12P55289 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH12P55289 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH12P55289 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH12P55289 AC138517.1-201ENST00000515724 568 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms