Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AL352984.2-202ENST00000613699 155 ntBASIC6.41□□□□□ -1.38
COPAP53621 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.41□□□□□ -1.38
COPAP53621 AC015660.5-201ENST00000623238 564 ntBASIC6.41□□□□□ -1.38
COPAP53621 AC079298.2-201ENST00000623885 459 ntBASIC6.41□□□□□ -1.38
COPAP53621 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 AC011815.2-201ENST00000618230 2021 ntBASIC6.41□□□□□ -1.38
COPAP53621 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.41□□□□□ -1.38
COPAP53621 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.41□□□□□ -1.38
COPAP53621 AC011416.1-201ENST00000514947 1732 ntBASIC6.41□□□□□ -1.38
COPAP53621 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPAP53621 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COPAP53621 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
COPAP53621 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COPAP53621 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COPAP53621 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COPAP53621 RNA5SP346-201ENST00000363541 121 ntBASIC6.4□□□□□ -1.38
COPAP53621 SNORD51.1-201ENST00000365405 77 ntBASIC6.4□□□□□ -1.38
COPAP53621 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 MIR323B-201ENST00000385269 82 ntBASIC6.4□□□□□ -1.38
COPAP53621 PTGES3P2-201ENST00000407942 482 ntBASIC6.4□□□□□ -1.38
COPAP53621 RN7SKP161-201ENST00000411110 305 ntBASIC6.4□□□□□ -1.38
COPAP53621 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AC009237.1-201ENST00000442127 744 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 EIF2S2P4-201ENST00000461070 984 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC104629.2-201ENST00000468627 598 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC105918.1-201ENST00000474399 838 ntBASIC6.4□□□□□ -1.38
COPAP53621 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
COPAP53621 LSM3P4-201ENST00000502948 309 ntBASIC6.4□□□□□ -1.38
COPAP53621 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.4□□□□□ -1.38
COPAP53621 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.4□□□□□ -1.38
COPAP53621 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 FABP5P6-201ENST00000510588 409 ntBASIC6.4□□□□□ -1.38
COPAP53621 HMGN1P15-201ENST00000513870 295 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.4□□□□□ -1.38
COPAP53621 AP003080.1-202ENST00000526526 915 ntBASIC6.4□□□□□ -1.38
COPAP53621 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.4□□□□□ -1.38
COPAP53621 AC079148.1-201ENST00000565944 819 ntBASIC6.4□□□□□ -1.38
COPAP53621 AP001496.3-201ENST00000580230 913 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.4□□□□□ -1.38
COPAP53621 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.4□□□□□ -1.38
COPAP53621 AL355816.2-201ENST00000610049 647 ntBASIC6.4□□□□□ -1.38
COPAP53621 AL138960.1-201ENST00000613838 513 ntBASIC6.4□□□□□ -1.38
COPAP53621 AL445493.3-201ENST00000619568 477 ntBASIC6.4□□□□□ -1.38
COPAP53621 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.4□□□□□ -1.38
COPAP53621 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.4□□□□□ -1.38
COPAP53621 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COPAP53621 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.4□□□□□ -1.38
COPAP53621 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.4□□□□□ -1.38
COPAP53621 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COPAP53621 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.4□□□□□ -1.39
COPAP53621 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.4□□□□□ -1.39
COPAP53621 AL136520.1-201ENST00000600311 1322 ntBASIC6.4□□□□□ -1.39
COPAP53621 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.4□□□□□ -1.39
COPAP53621 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 AC093225.1-201ENST00000506867 1408 ntBASIC6.4□□□□□ -1.39
COPAP53621 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.4□□□□□ -1.39
COPAP53621 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.4□□□□□ -1.39
COPAP53621 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
COPAP53621 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.4□□□□□ -1.39
COPAP53621 AC018717.1-201ENST00000457712 1505 ntBASIC6.4□□□□□ -1.39
COPAP53621 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.4□□□□□ -1.39
COPAP53621 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COPAP53621 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPAP53621 Z95114.1-201ENST00000624264 14574 ntBASIC6.39□□□□□ -1.39
COPAP53621 HSPD1P9-201ENST00000420325 1636 ntBASIC6.39□□□□□ -1.39
COPAP53621 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
COPAP53621 AC079753.1-201ENST00000623243 3868 ntBASIC6.39□□□□□ -1.39
COPAP53621 AC097063.1-201ENST00000426714 1797 ntBASIC6.39□□□□□ -1.39
COPAP53621 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPAP53621 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.39□□□□□ -1.39
COPAP53621 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPAP53621 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COPAP53621 RNA5SP514-201ENST00000363717 111 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms