Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP98P52948 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
NUP98P52948 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 RBMY2QP-201ENST00000429799 1147 ntBASIC6.94□□□□□ -1.3
NUP98P52948 EIF1P7-201ENST00000487533 337 ntBASIC6.94□□□□□ -1.3
NUP98P52948 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP98P52948 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP98P52948 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP98P52948 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP98P52948 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP98P52948 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.94□□□□□ -1.3
NUP98P52948 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP98P52948 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP98P52948 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP98P52948 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 AC010329.1-201ENST00000593903 8328 ntBASIC6.93□□□□□ -1.3
NUP98P52948 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 AL133388.1-201ENST00000404509 287 ntBASIC6.93□□□□□ -1.3
NUP98P52948 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP98P52948 RPL23AP27-201ENST00000415161 451 ntBASIC6.93□□□□□ -1.3
NUP98P52948 FAM96AP1-201ENST00000430879 482 ntBASIC6.93□□□□□ -1.3
NUP98P52948 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP98P52948 TMEM183AP1-205ENST00000432739 290 ntBASIC6.93□□□□□ -1.3
NUP98P52948 AL365220.1-201ENST00000432923 399 ntBASIC6.93□□□□□ -1.3
NUP98P52948 USP24P1-201ENST00000433802 779 ntBASIC6.93□□□□□ -1.3
NUP98P52948 PSMD10P3-201ENST00000437000 448 ntBASIC6.93□□□□□ -1.3
NUP98P52948 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP98P52948 RPL7P45-201ENST00000455851 743 ntBASIC6.93□□□□□ -1.3
NUP98P52948 HMGB1P44-201ENST00000508597 572 ntBASIC6.93□□□□□ -1.3
NUP98P52948 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.93□□□□□ -1.3
NUP98P52948 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.93□□□□□ -1.3
NUP98P52948 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.93□□□□□ -1.3
NUP98P52948 HIRAP1-201ENST00000605318 787 ntBASIC6.93□□□□□ -1.3
NUP98P52948 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 AP001784.1-201ENST00000624107 428 ntBASIC6.93□□□□□ -1.3
NUP98P52948 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NUP98P52948 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NUP98P52948 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NUP98P52948 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 SRSF1P1-201ENST00000424058 520 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.92□□□□□ -1.3
NUP98P52948 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUP98P52948 AC022832.1-201ENST00000530718 645 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC024940.3-201ENST00000538551 316 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.92□□□□□ -1.3
NUP98P52948 AC090527.3-201ENST00000619041 548 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AL008638.3-201ENST00000623027 5182 ntBASIC6.92□□□□□ -1.3
NUP98P52948 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUP98P52948 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUP98P52948 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NUP98P52948 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.92□□□□□ -1.3
NUP98P52948 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NUP98P52948 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUP98P52948 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 U3.36-201ENST00000408418 213 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AL133325.1-201ENST00000421090 382 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 GAPDHP25-201ENST00000447061 1001 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC115223.1-201ENST00000466377 870 ntBASIC6.92□□□□□ -1.3
NUP98P52948 RPL15P21-201ENST00000495592 567 ntBASIC6.92□□□□□ -1.3
NUP98P52948 NDUFB5P1-201ENST00000508134 564 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC147055.3-201ENST00000510547 851 ntBASIC6.92□□□□□ -1.3
NUP98P52948 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.92□□□□□ -1.3
NUP98P52948 AC010245.2-201ENST00000606908 1167 ntBASIC6.92□□□□□ -1.3
NUP98P52948 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.92□□□□□ -1.3
NUP98P52948 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
NUP98P52948 AC140479.2-201ENST00000421567 3130 ntBASIC6.92□□□□□ -1.3
NUP98P52948 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms