Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 AC005618.1-201ENST00000606901 3148 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 SNORA70H-201ENST00000383910 135 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 SNORA70J-201ENST00000384182 135 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 AL356967.1-201ENST00000406305 431 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 AC073648.4-201ENST00000442655 781 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN4AP35499 ACA64.4-201ENST00000459070 127 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 RNU1-88P-201ENST00000459274 128 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 AC090114.3-201ENST00000479267 829 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 RN7SKP99-201ENST00000517028 307 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 MIR3934-201ENST00000579806 107 ntBASIC6.76□□□□□ -1.33
SCN4AP35499 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.76□□□□□ -1.33
SCN4AP35499 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN4AP35499 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.76□□□□□ -1.33
SCN4AP35499 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SCN4AP35499 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SCN4AP35499 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN4AP35499 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SCN4AP35499 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.75□□□□□ -1.33
SCN4AP35499 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN4AP35499 AP004289.1-201ENST00000436307 2205 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 AL157831.2-201ENST00000564681 3095 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN4AP35499 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SCN4AP35499 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 RNU1-43P-201ENST00000365052 165 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SCN4AP35499 AC093162.1-201ENST00000419682 124 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN4AP35499 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.75□□□□□ -1.33
SCN4AP35499 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.75□□□□□ -1.33
SCN4AP35499 AC007494.1-201ENST00000562293 760 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.75□□□□□ -1.33
SCN4AP35499 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCN4AP35499 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SCN4AP35499 AL356317.1-201ENST00000396110 1436 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 MROH3P-201ENST00000435735 2676 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SCN4AP35499 SNORA67-201ENST00000384423 137 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC105399.1-202ENST00000447303 205 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 STRADBP1-201ENST00000478954 1281 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 RPL17P2-201ENST00000491913 451 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC074255.1-201ENST00000511259 501 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 RNU6-941P-201ENST00000516346 108 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN4AP35499 RAB9BP1-201ENST00000519581 626 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.74□□□□□ -1.33
SCN4AP35499 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 AC109583.2-201ENST00000617367 129 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC087385.3-201ENST00000620477 187 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AL353662.3-201ENST00000625131 237 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SCN4AP35499 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 AC012618.3-205ENST00000637896 1496 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.74□□□□□ -1.33
SCN4AP35499 AL136531.3-201ENST00000624378 3658 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 AC005831.1-201ENST00000624384 1697 ntBASIC6.74□□□□□ -1.33
SCN4AP35499 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.74□□□□□ -1.33
SCN4AP35499 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.74□□□□□ -1.33
SCN4AP35499 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SCN4AP35499 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SCN4AP35499 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms