Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 AL731532.1-201ENST00000623972 4236 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 RNA5SP91-201ENST00000390902 119 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXD13P35453 AL590399.2-201ENST00000427536 309 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 XKRYP6-201ENST00000440468 1116 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 XKRYP3-201ENST00000442113 1116 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 HMGN1P2-201ENST00000445197 310 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 RPS17P15-201ENST00000475609 349 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXD13P35453 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXD13P35453 SNORA48.9-201ENST00000516419 162 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 AC060775.1-201ENST00000518241 520 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXD13P35453 TOMM20P1-201ENST00000534518 427 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXD13P35453 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 NPM1P45-201ENST00000583151 559 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXD13P35453 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 OR8A1-204ENST00000642111 1145 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 KYNUP3-201ENST00000574386 1341 ntBASIC6.38□□□□□ -1.39
HOXD13P35453 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXD13P35453 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD13P35453 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXD13P35453 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
HOXD13P35453 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXD13P35453 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXD13P35453 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 PDZK1P1-202ENST00000425209 1350 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXD13P35453 U3.10-201ENST00000364459 214 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXD13P35453 RN7SKP279-201ENST00000411383 298 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AL357752.1-201ENST00000412817 349 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXD13P35453 AL356390.1-201ENST00000455684 397 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 RPSAP37-201ENST00000470913 821 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 ST13P12-201ENST00000508958 1094 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 AC008126.1-201ENST00000549019 480 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXD13P35453 AC096996.1-201ENST00000563813 325 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 AC027243.2-201ENST00000602530 724 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXD13P35453 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AP005431.1-201ENST00000618479 319 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AC022400.9-201ENST00000623633 273 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 AC129915.3-201ENST00000634128 948 ntBASIC6.37□□□□□ -1.39
HOXD13P35453 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXD13P35453 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXD13P35453 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXD13P35453 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXD13P35453 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXD13P35453 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXD13P35453 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXD13P35453 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms