Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC091390.1-201ENST00000433904 331 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A5P29400 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A5P29400 RN7SL738P-201ENST00000470264 297 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 RPL5P22-201ENST00000480199 884 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 CEACAMP10-202ENST00000495431 496 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A5P29400 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.65□□□□□ -1.34
COL4A5P29400 AGGF1P7-201ENST00000562369 913 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.65□□□□□ -1.34
COL4A5P29400 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A5P29400 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL4A5P29400 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A5P29400 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL4A5P29400 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A5P29400 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A5P29400 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A5P29400 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.65□□□□□ -1.35
COL4A5P29400 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A5P29400 MAPK10-338ENST00000641647 3362 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.65□□□□□ -1.35
COL4A5P29400 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A5P29400 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A5P29400 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.65□□□□□ -1.35
COL4A5P29400 AC092647.3-201ENST00000443044 633 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 AC092647.2-201ENST00000452998 253 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.65□□□□□ -1.35
COL4A5P29400 AC006463.2-201ENST00000473326 348 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 AC024940.3-201ENST00000538551 316 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.65□□□□□ -1.35
COL4A5P29400 DHFRP1-201ENST00000579682 559 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 MIR3934-201ENST00000579806 107 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 AL133406.3-201ENST00000606817 541 ntBASIC6.65□□□□□ -1.35
COL4A5P29400 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A5P29400 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.65□□□□□ -1.35
COL4A5P29400 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL4A5P29400 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL4A5P29400 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A5P29400 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A5P29400 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL4A5P29400 SNURFL-201ENST00000309296 343 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 SLC25A14P1-201ENST00000502867 901 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A5P29400 TOMM22P4-201ENST00000511318 336 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 AC004980.4-201ENST00000513375 203 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 AC092490.3-201ENST00000545370 572 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 AC063949.1-201ENST00000552900 865 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.64□□□□□ -1.35
COL4A5P29400 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.64□□□□□ -1.35
COL4A5P29400 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A5P29400 AC067852.5-201ENST00000589299 310 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 AC087283.1-201ENST00000604029 1074 ntBASIC6.64□□□□□ -1.35
COL4A5P29400 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A5P29400 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A5P29400 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL4A5P29400 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A5P29400 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.63□□□□□ -1.35
COL4A5P29400 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.63□□□□□ -1.35
COL4A5P29400 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 AL121594.2-201ENST00000541658 472 ntBASIC6.63□□□□□ -1.35
COL4A5P29400 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A5P29400 AC007346.2-201ENST00000564816 892 ntBASIC6.63□□□□□ -1.35
COL4A5P29400 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 AC130448.2-201ENST00000624082 374 ntBASIC6.63□□□□□ -1.35
COL4A5P29400 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
COL4A5P29400 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A5P29400 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms