Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TPM1P09493 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 AC093849.1-201ENST00000563631 2209 ntBASIC6.31□□□□□ -1.4
TPM1P09493 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM1P09493 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM1P09493 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 AC003985.2-201ENST00000562268 1669 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TPM1P09493 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM1P09493 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TPM1P09493 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM1P09493 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TPM1P09493 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM1P09493 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 VN1R20P-201ENST00000425215 966 ntBASIC6.31□□□□□ -1.4
TPM1P09493 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 AC092601.1-201ENST00000444526 383 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AL445466.1-201ENST00000448432 357 ntBASIC6.31□□□□□ -1.4
TPM1P09493 OR7E116P-201ENST00000448529 957 ntBASIC6.31□□□□□ -1.4
TPM1P09493 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TPM1P09493 SNORD125-201ENST00000459538 96 ntBASIC6.31□□□□□ -1.4
TPM1P09493 PSAT1P4-201ENST00000466500 526 ntBASIC6.31□□□□□ -1.4
TPM1P09493 OR7E22P-201ENST00000478335 1035 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AC005017.1-201ENST00000482002 490 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AC108103.1-201ENST00000511286 446 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM1P09493 ZNF519P4-201ENST00000514008 125 ntBASIC6.31□□□□□ -1.4
TPM1P09493 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM1P09493 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM1P09493 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM1P09493 AC012368.3-201ENST00000604190 219 ntBASIC6.31□□□□□ -1.4
TPM1P09493 FAM72A-208ENST00000607379 1139 ntBASIC6.31□□□□□ -1.4
TPM1P09493 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.31□□□□□ -1.4
TPM1P09493 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM1P09493 CDY3P-201ENST00000454543 1618 ntBASIC6.31□□□□□ -1.4
TPM1P09493 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM1P09493 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
TPM1P09493 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TPM1P09493 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.3□□□□□ -1.4
TPM1P09493 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM1P09493 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM1P09493 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM1P09493 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 MIR431-201ENST00000385266 114 ntBASIC6.3□□□□□ -1.4
TPM1P09493 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM1P09493 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 THEM7P-201ENST00000419556 672 ntBASIC6.3□□□□□ -1.4
TPM1P09493 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 TMEM183AP1-205ENST00000432739 290 ntBASIC6.3□□□□□ -1.4
TPM1P09493 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 AL359265.1-201ENST00000440296 795 ntBASIC6.3□□□□□ -1.4
TPM1P09493 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 RPS7P6-201ENST00000485777 579 ntBASIC6.3□□□□□ -1.4
TPM1P09493 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AC122714.1-201ENST00000502510 459 ntBASIC6.3□□□□□ -1.4
TPM1P09493 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 RNU6-1334P-201ENST00000516032 105 ntBASIC6.3□□□□□ -1.4
TPM1P09493 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.3□□□□□ -1.4
TPM1P09493 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.3□□□□□ -1.4
TPM1P09493 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM1P09493 AL512413.1-201ENST00000606489 382 ntBASIC6.3□□□□□ -1.4
TPM1P09493 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.3□□□□□ -1.4
TPM1P09493 FAM27E2-201ENST00000619668 403 ntBASIC6.3□□□□□ -1.4
TPM1P09493 AL035661.1-201ENST00000620459 1144 ntBASIC6.3□□□□□ -1.4
TPM1P09493 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 AC010325.3-201ENST00000641084 394 ntBASIC6.3□□□□□ -1.4
TPM1P09493 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM1P09493 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM1P09493 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM1P09493 AC007938.2-201ENST00000604666 2634 ntBASIC6.29□□□□□ -1.4
TPM1P09493 MFSD8-219ENST00000641228 2559 ntBASIC6.29□□□□□ -1.4
TPM1P09493 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms