Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P09429 MIR4732-201ENST00000581873 76 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AC024267.2-201ENST00000582737 417 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AC026898.1-201ENST00000586404 571 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.53□□□□□ -1.2
HMGB1P09429 AC006272.2-201ENST00000594725 163 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AC022001.1-201ENST00000605193 268 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AL390877.1-201ENST00000605704 214 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 MIR1264-201ENST00000616374 69 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AL645927.2-201ENST00000618350 349 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 AC015726.3-201ENST00000624501 418 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P09429 AL354854.1-201ENST00000455940 1363 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.53□□□□□ -1.2
HMGB1P09429 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P09429 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P09429 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P09429 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P09429 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
HMGB1P09429 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 AL136984.1-201ENST00000607611 1893 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC090017.1-201ENST00000548612 1779 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 MIR142-201ENST00000384835 87 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 RNA5SP115-201ENST00000411160 107 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC211486.3-201ENST00000412694 621 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 LINC01881-201ENST00000416103 412 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 RPL21P50-201ENST00000417698 477 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AL031681.1-201ENST00000443304 400 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AL589765.3-201ENST00000446084 462 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 PTMAP3-201ENST00000447474 330 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC092967.1-201ENST00000449016 481 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 PPIAP32-201ENST00000449940 472 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 CCDC75P1-201ENST00000469247 791 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 OR9A1P-202ENST00000484361 945 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P09429 MTND2P31-201ENST00000512602 616 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.52□□□□□ -1.21
HMGB1P09429 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P09429 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.52□□□□□ -1.21
HMGB1P09429 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 AC037479.1-201ENST00000558361 625 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P09429 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.52□□□□□ -1.21
HMGB1P09429 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 AC116447.1-201ENST00000613153 453 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AL137246.2-201ENST00000613439 662 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC139769.3-201ENST00000618383 175 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC015908.5-201ENST00000623289 343 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 AC022726.2-201ENST00000634673 547 ntBASIC7.52□□□□□ -1.21
HMGB1P09429 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P09429 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P09429 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P09429 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
HMGB1P09429 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
HMGB1P09429 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMGB1P09429 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.51□□□□□ -1.21
HMGB1P09429 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.51□□□□□ -1.21
HMGB1P09429 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMGB1P09429 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMGB1P09429 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMGB1P09429 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMGB1P09429 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.51□□□□□ -1.21
HMGB1P09429 RNU6-603P-201ENST00000411403 107 ntBASIC7.51□□□□□ -1.21
HMGB1P09429 AC116036.1-201ENST00000412199 367 ntBASIC7.51□□□□□ -1.21
HMGB1P09429 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.51□□□□□ -1.21
HMGB1P09429 TRGV6-201ENST00000417928 299 ntBASIC7.51□□□□□ -1.21
HMGB1P09429 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.51□□□□□ -1.21
HMGB1P09429 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.51□□□□□ -1.21
HMGB1P09429 VPS25P1-201ENST00000455691 508 ntBASIC7.51□□□□□ -1.21
HMGB1P09429 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.51□□□□□ -1.21
HMGB1P09429 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
HMGB1P09429 RN7SL714P-201ENST00000487050 298 ntBASIC7.51□□□□□ -1.21
HMGB1P09429 AC015524.1-201ENST00000491585 472 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms