Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.29□□□□□ -1.4
VTNP04004 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.29□□□□□ -1.4
VTNP04004 AC060766.1-201ENST00000590824 627 ntBASIC6.29□□□□□ -1.4
VTNP04004 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.29□□□□□ -1.4
VTNP04004 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTNP04004 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.29□□□□□ -1.4
VTNP04004 AC007204.2-201ENST00000615022 616 ntBASIC6.29□□□□□ -1.4
VTNP04004 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.29□□□□□ -1.4
VTNP04004 AL035661.1-201ENST00000620459 1144 ntBASIC6.29□□□□□ -1.4
VTNP04004 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTNP04004 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.29□□□□□ -1.4
VTNP04004 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VTNP04004 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
VTNP04004 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
VTNP04004 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTNP04004 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.29□□□□□ -1.4
VTNP04004 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTNP04004 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VTNP04004 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VTNP04004 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 RNA5SP30-201ENST00000365552 115 ntBASIC6.28□□□□□ -1.4
VTNP04004 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 MIR130A-201ENST00000385274 89 ntBASIC6.28□□□□□ -1.4
VTNP04004 SNORA11B-201ENST00000408175 129 ntBASIC6.28□□□□□ -1.4
VTNP04004 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.28□□□□□ -1.4
VTNP04004 RN7SKP278-201ENST00000410504 342 ntBASIC6.28□□□□□ -1.4
VTNP04004 RPS6P23-201ENST00000413224 722 ntBASIC6.28□□□□□ -1.4
VTNP04004 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.28□□□□□ -1.4
VTNP04004 AL365220.1-201ENST00000432923 399 ntBASIC6.28□□□□□ -1.4
VTNP04004 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.28□□□□□ -1.4
VTNP04004 AL450996.1-201ENST00000445574 1202 ntBASIC6.28□□□□□ -1.4
VTNP04004 RANP1-206ENST00000455094 651 ntBASIC6.28□□□□□ -1.4
VTNP04004 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 DUTP1-201ENST00000493631 470 ntBASIC6.28□□□□□ -1.4
VTNP04004 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.28□□□□□ -1.4
VTNP04004 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.28□□□□□ -1.4
VTNP04004 AC074255.1-201ENST00000511259 501 ntBASIC6.28□□□□□ -1.4
VTNP04004 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.28□□□□□ -1.4
VTNP04004 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.28□□□□□ -1.4
VTNP04004 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 MRPS21P7-201ENST00000566937 238 ntBASIC6.28□□□□□ -1.4
VTNP04004 RBM22P12-201ENST00000567098 1255 ntBASIC6.28□□□□□ -1.4
VTNP04004 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 AC018659.2-201ENST00000624690 715 ntBASIC6.28□□□□□ -1.4
VTNP04004 AC009950.2-201ENST00000636548 183 ntBASIC6.28□□□□□ -1.4
VTNP04004 HSPD1P8-201ENST00000400121 1658 ntBASIC6.28□□□□□ -1.4
VTNP04004 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.28□□□□□ -1.4
VTNP04004 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTNP04004 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.28□□□□□ -1.4
VTNP04004 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
VTNP04004 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.4
VTNP04004 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.27□□□□□ -1.41
VTNP04004 CR788268.1-201ENST00000603931 1809 ntBASIC6.27□□□□□ -1.41
VTNP04004 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.27□□□□□ -1.41
VTNP04004 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VTNP04004 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VTNP04004 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTNP04004 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VTNP04004 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.27□□□□□ -1.41
VTNP04004 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.27□□□□□ -1.41
VTNP04004 CFL1P1-202ENST00000432948 411 ntBASIC6.27□□□□□ -1.41
VTNP04004 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.27□□□□□ -1.41
VTNP04004 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.27□□□□□ -1.41
VTNP04004 AC007386.1-201ENST00000455212 582 ntBASIC6.27□□□□□ -1.41
VTNP04004 LDHBP2-201ENST00000456969 1005 ntBASIC6.27□□□□□ -1.41
VTNP04004 AL133445.1-201ENST00000467051 452 ntBASIC6.27□□□□□ -1.41
VTNP04004 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
VTNP04004 UBA52P7-201ENST00000486088 380 ntBASIC6.27□□□□□ -1.41
VTNP04004 TRBV5-2-201ENST00000489095 273 ntBASIC6.27□□□□□ -1.41
VTNP04004 RN7SL547P-201ENST00000490793 290 ntBASIC6.27□□□□□ -1.41
VTNP04004 FTH1P8-201ENST00000498161 514 ntBASIC6.27□□□□□ -1.41
VTNP04004 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.27□□□□□ -1.41
VTNP04004 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.27□□□□□ -1.41
VTNP04004 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.27□□□□□ -1.41
VTNP04004 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.27□□□□□ -1.41
VTNP04004 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms