Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AZGP1P2-201ENST00000454506 345 ntBASIC7.39□□□□□ -1.23
COL3A1P02461 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL3A1P02461 AC090638.1-201ENST00000498296 909 ntBASIC7.39□□□□□ -1.23
COL3A1P02461 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.39□□□□□ -1.23
COL3A1P02461 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.39□□□□□ -1.23
COL3A1P02461 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.39□□□□□ -1.23
COL3A1P02461 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.39□□□□□ -1.23
COL3A1P02461 AC132068.1-201ENST00000623805 459 ntBASIC7.39□□□□□ -1.23
COL3A1P02461 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL3A1P02461 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL3A1P02461 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL3A1P02461 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.39□□□□□ -1.23
COL3A1P02461 AC137056.2-201ENST00000624055 1958 ntBASIC7.39□□□□□ -1.23
COL3A1P02461 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL3A1P02461 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.39□□□□□ -1.23
COL3A1P02461 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC7.39□□□□□ -1.23
COL3A1P02461 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.39□□□□□ -1.23
COL3A1P02461 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.38□□□□□ -1.23
COL3A1P02461 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.38□□□□□ -1.23
COL3A1P02461 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 RN7SKP59-201ENST00000410520 314 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.38□□□□□ -1.23
COL3A1P02461 OR10T1P-201ENST00000424327 947 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 RPL34P27-201ENST00000428810 349 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.38□□□□□ -1.23
COL3A1P02461 SBDSP1-204ENST00000453858 737 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 RN7SL799P-201ENST00000475891 298 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 ATP5LP5-201ENST00000483050 299 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 OR5AM1P-201ENST00000532136 1032 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.38□□□□□ -1.23
COL3A1P02461 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.38□□□□□ -1.23
COL3A1P02461 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.38□□□□□ -1.23
COL3A1P02461 AC005840.5-201ENST00000619166 599 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.38□□□□□ -1.23
COL3A1P02461 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
COL3A1P02461 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.38□□□□□ -1.23
COL3A1P02461 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.38□□□□□ -1.23
COL3A1P02461 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL3A1P02461 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.38□□□□□ -1.23
COL3A1P02461 AC130360.2-201ENST00000533477 1556 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 AL355834.1-201ENST00000556602 3965 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 UG0898H09-202ENST00000623646 7040 ntBASIC7.38□□□□□ -1.23
COL3A1P02461 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 AC068870.1-201ENST00000563737 2455 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL3A1P02461 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL3A1P02461 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 RNU6-673P-201ENST00000365084 104 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 MIR937-201ENST00000401271 86 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 DBIP1-201ENST00000401435 260 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 RPS6P14-201ENST00000425165 719 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 RN7SL222P-201ENST00000476452 299 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 RPS4XP14-201ENST00000493072 781 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.37□□□□□ -1.23
COL3A1P02461 RN7SKP67-201ENST00000515905 235 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 AC092953.2-201ENST00000608000 699 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.37□□□□□ -1.23
COL3A1P02461 AC015712.7-201ENST00000615211 635 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 MIR6826-201ENST00000617808 98 ntBASIC7.37□□□□□ -1.23
COL3A1P02461 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.37□□□□□ -1.23
COL3A1P02461 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL3A1P02461 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL3A1P02461 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL3A1P02461 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
COL3A1P02461 RPL23AP18-201ENST00000416139 468 ntBASIC7.36□□□□□ -1.23
COL3A1P02461 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.36□□□□□ -1.23
COL3A1P02461 Z93019.1-201ENST00000416450 973 ntBASIC7.36□□□□□ -1.23
COL3A1P02461 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.36□□□□□ -1.23
COL3A1P02461 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.36□□□□□ -1.23
COL3A1P02461 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.36□□□□□ -1.23
COL3A1P02461 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.36□□□□□ -1.23
COL3A1P02461 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.36□□□□□ -1.23
COL3A1P02461 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.36□□□□□ -1.23
COL3A1P02461 SNORD125-201ENST00000459538 96 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms