Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
TNFP01375 AL121594.2-201ENST00000541658 472 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC244502.2-201ENST00000543361 851 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFP01375 RBM22P12-201ENST00000567098 1255 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 AP000864.1-201ENST00000609424 650 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC079395.2-201ENST00000610982 737 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC069234.4-201ENST00000621276 412 ntBASIC5.62□□□□□ -1.51
TNFP01375 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFP01375 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.62□□□□□ -1.51
TNFP01375 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 AC239868.2-201ENST00000564237 4527 ntBASIC5.61□□□□□ -1.51
TNFP01375 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TNFP01375 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 GAPDHP42-201ENST00000406848 981 ntBASIC5.61□□□□□ -1.51
TNFP01375 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 MTND4LP17-201ENST00000414607 293 ntBASIC5.61□□□□□ -1.51
TNFP01375 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.61□□□□□ -1.51
TNFP01375 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 AL133173.1-201ENST00000423458 397 ntBASIC5.61□□□□□ -1.51
TNFP01375 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.61□□□□□ -1.51
TNFP01375 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 MEMO1P4-201ENST00000453590 386 ntBASIC5.61□□□□□ -1.51
TNFP01375 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
TNFP01375 RN7SL177P-201ENST00000476596 299 ntBASIC5.61□□□□□ -1.51
TNFP01375 SIAH1P1-201ENST00000479411 923 ntBASIC5.61□□□□□ -1.51
TNFP01375 TRBV5-2-201ENST00000489095 273 ntBASIC5.61□□□□□ -1.51
TNFP01375 RN7SL629P-201ENST00000489622 285 ntBASIC5.61□□□□□ -1.51
TNFP01375 AC073610.1-201ENST00000489971 396 ntBASIC5.61□□□□□ -1.51
TNFP01375 DUTP7-201ENST00000507982 486 ntBASIC5.61□□□□□ -1.51
TNFP01375 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.61□□□□□ -1.51
TNFP01375 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.61□□□□□ -1.51
TNFP01375 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.61□□□□□ -1.51
TNFP01375 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.61□□□□□ -1.51
TNFP01375 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TNFP01375 AC090022.1-201ENST00000546569 311 ntBASIC5.61□□□□□ -1.51
TNFP01375 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 AC126615.2-201ENST00000553003 515 ntBASIC5.61□□□□□ -1.51
TNFP01375 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.61□□□□□ -1.51
TNFP01375 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TNFP01375 CASC19-248ENST00000641674 1356 ntBASIC5.61□□□□□ -1.51
TNFP01375 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFP01375 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TNFP01375 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFP01375 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 CR788268.1-201ENST00000603931 1809 ntBASIC5.6□□□□□ -1.51
TNFP01375 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
TNFP01375 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFP01375 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFP01375 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TNFP01375 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 AL391422.1-201ENST00000402155 436 ntBASIC5.6□□□□□ -1.51
TNFP01375 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 VN1R21P-201ENST00000426703 765 ntBASIC5.6□□□□□ -1.51
TNFP01375 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFP01375 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFP01375 RPS4XP14-201ENST00000493072 781 ntBASIC5.6□□□□□ -1.51
TNFP01375 AC108693.1-201ENST00000496068 432 ntBASIC5.6□□□□□ -1.51
TNFP01375 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFP01375 BX510359.5-201ENST00000515651 304 ntBASIC5.6□□□□□ -1.51
TNFP01375 AC078899.1-201ENST00000521432 1185 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms