Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 OR7E7P-201ENST00000455678 1012 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 GYG1P1-201ENST00000460864 698 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC092754.2-201ENST00000463506 460 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 RN7SL868P-201ENST00000485915 303 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 RN7SL518P-201ENST00000491887 280 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC091951.3-201ENST00000504093 246 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC112225.1-201ENST00000508230 297 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC110775.1-201ENST00000513721 462 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.21□□□□□ -1.42
CNOT4O95628 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC008015.1-201ENST00000555505 465 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC122134.1-201ENST00000565664 1104 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC023827.2-201ENST00000566880 1061 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CNOT4O95628 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC004987.4-201ENST00000603383 338 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 LSM1P2-201ENST00000604911 322 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 OR2AS2P-201ENST00000606902 342 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AC092354.2-201ENST00000607786 514 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC022079.2-201ENST00000619739 566 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.21□□□□□ -1.42
CNOT4O95628 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
CNOT4O95628 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.21□□□□□ -1.42
CNOT4O95628 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CNOT4O95628 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CNOT4O95628 AC092821.2-201ENST00000545710 2042 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 SAMMSON-210ENST00000641260 1308 ntBASIC6.21□□□□□ -1.42
CNOT4O95628 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CNOT4O95628 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNOT4O95628 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.21□□□□□ -1.42
CNOT4O95628 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 CAP1P2-201ENST00000417455 1409 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 Y_RNA.194-201ENST00000363985 102 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 RN7SKP62-201ENST00000384539 329 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 MIR99A-201ENST00000384906 81 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 MIR621-201ENST00000384919 96 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 PDCL3P5-201ENST00000398028 722 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL136100.1-201ENST00000407696 330 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 RN7SKP148-201ENST00000410179 275 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL445183.3-201ENST00000414168 502 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AL773545.3-201ENST00000414297 706 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 BX119917.1-201ENST00000432517 502 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 AL353898.1-201ENST00000444055 238 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 MYO5BP2-201ENST00000449815 1277 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 RPL7P45-201ENST00000455851 743 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 MTCO2P18-201ENST00000457151 658 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 RPL5P13-201ENST00000462840 709 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 RPL5P33-201ENST00000487833 905 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 AC109927.2-201ENST00000506416 303 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.2□□□□□ -1.42
CNOT4O95628 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 NACAP5-201ENST00000509863 636 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 RNU6-1028P-201ENST00000517164 93 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms