Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 AC138627.1-203ENST00000641872 1680 ntBASIC8.56□□□□□ -1.04
RNF40O75150 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 NBPF25P-201ENST00000606775 2019 ntBASIC8.56□□□□□ -1.04
RNF40O75150 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AC061975.5-201ENST00000584928 1441 ntBASIC8.56□□□□□ -1.04
RNF40O75150 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 EIF4BP2-201ENST00000416702 1794 ntBASIC8.56□□□□□ -1.04
RNF40O75150 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 RNU6-433P-201ENST00000363216 104 ntBASIC8.56□□□□□ -1.04
RNF40O75150 RNA5SP427-201ENST00000365323 119 ntBASIC8.56□□□□□ -1.04
RNF40O75150 RNA5SP88-201ENST00000365560 109 ntBASIC8.56□□□□□ -1.04
RNF40O75150 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 AL138807.1-201ENST00000400354 459 ntBASIC8.56□□□□□ -1.04
RNF40O75150 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF40O75150 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 RPL23AP34-201ENST00000423483 410 ntBASIC8.56□□□□□ -1.04
RNF40O75150 RPL19P21-201ENST00000424919 591 ntBASIC8.56□□□□□ -1.04
RNF40O75150 MTCO1P54-201ENST00000430139 712 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 YWHAEP5-201ENST00000431545 765 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 AC016734.1-201ENST00000436998 654 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF40O75150 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AL035407.2-201ENST00000454090 378 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC107956.2-201ENST00000496042 454 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 NDUFB4P2-201ENST00000509515 391 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC026412.2-201ENST00000512270 1075 ntBASIC8.56□□□□□ -1.04
RNF40O75150 PTP4A1P4-201ENST00000512479 322 ntBASIC8.56□□□□□ -1.04
RNF40O75150 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AC103968.1-201ENST00000557841 573 ntBASIC8.56□□□□□ -1.04
RNF40O75150 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 MIR3689F-201ENST00000579617 66 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF40O75150 AC091488.1-201ENST00000604239 660 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC016405.2-201ENST00000607393 312 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AL355974.3-201ENST00000617383 467 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC007342.8-201ENST00000623278 678 ntBASIC8.56□□□□□ -1.04
RNF40O75150 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 AL078596.1-201ENST00000624856 447 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC108724.2-201ENST00000634593 290 ntBASIC8.56□□□□□ -1.04
RNF40O75150 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.56□□□□□ -1.04
RNF40O75150 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.56□□□□□ -1.04
RNF40O75150 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.56□□□□□ -1.04
RNF40O75150 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.56□□□□□ -1.04
RNF40O75150 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.56□□□□□ -1.04
RNF40O75150 MTND4P1-201ENST00000457501 1466 ntBASIC8.56□□□□□ -1.04
RNF40O75150 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RNF40O75150 AC008817.1-201ENST00000504215 1562 ntBASIC8.56□□□□□ -1.04
RNF40O75150 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.56□□□□□ -1.04
RNF40O75150 AC008985.1-201ENST00000624169 2239 ntBASIC8.56□□□□□ -1.04
RNF40O75150 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.56□□□□□ -1.04
RNF40O75150 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 LINC01347-201ENST00000417964 355 ntBASIC8.55□□□□□ -1.04
RNF40O75150 OR1AA1P-201ENST00000419597 916 ntBASIC8.55□□□□□ -1.04
RNF40O75150 PUDPP1-201ENST00000421058 495 ntBASIC8.55□□□□□ -1.04
RNF40O75150 YBX1P8-201ENST00000421881 943 ntBASIC8.55□□□□□ -1.04
RNF40O75150 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RNF40O75150 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 Z98949.2-201ENST00000440996 144 ntBASIC8.55□□□□□ -1.04
RNF40O75150 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.55□□□□□ -1.04
RNF40O75150 AL022237.1-201ENST00000446663 358 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.55□□□□□ -1.04
RNF40O75150 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.55□□□□□ -1.04
RNF40O75150 Z82190.1-201ENST00000454534 490 ntBASIC8.55□□□□□ -1.04
RNF40O75150 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms