Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN2BO60939 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN2BO60939 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN2BO60939 AL139099.4-201ENST00000614802 114 ntBASIC5.48□□□□□ -1.53
SCN2BO60939 AC004801.6-201ENST00000616571 978 ntBASIC5.48□□□□□ -1.53
SCN2BO60939 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN2BO60939 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SCN2BO60939 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN2BO60939 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN2BO60939 BCORP1-203ENST00000513194 5093 ntBASIC5.48□□□□□ -1.53
SCN2BO60939 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN2BO60939 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
SCN2BO60939 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SCN2BO60939 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN2BO60939 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 AC005261.6-201ENST00000623072 1387 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 RNFT1P3-201ENST00000340898 1052 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN2BO60939 GCNT1P4-201ENST00000404096 329 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.47□□□□□ -1.53
SCN2BO60939 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 AC013410.1-201ENST00000436223 1232 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 CYCSP51-201ENST00000443545 318 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 TIMM8BP2-201ENST00000445940 251 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.47□□□□□ -1.53
SCN2BO60939 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 AC021146.10-201ENST00000515628 706 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN2BO60939 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN2BO60939 AC005618.4-201ENST00000625053 554 ntBASIC5.47□□□□□ -1.53
SCN2BO60939 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN2BO60939 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SCN2BO60939 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN2BO60939 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.46□□□□□ -1.53
SCN2BO60939 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN2BO60939 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 AC015689.2-201ENST00000528172 1738 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCN2BO60939 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCN2BO60939 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 CLNS1AP1-201ENST00000435954 682 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 RNU1-88P-201ENST00000459274 128 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 AC098847.1-201ENST00000473094 348 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 AC021006.1-201ENST00000489849 553 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 EIF4E2P2-201ENST00000492033 736 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN2BO60939 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN2BO60939 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN2BO60939 AC108673.3-201ENST00000609183 335 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.54
SCN2BO60939 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN2BO60939 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SCN2BO60939 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN2BO60939 PARP4P2-201ENST00000446672 3326 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms