Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.01□□□□□ -1.45
SMAD6O43541 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SMAD6O43541 RNA5SP211-201ENST00000365516 117 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SMAD6O43541 RNU6-1176P-201ENST00000390955 107 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC016739.1-201ENST00000405359 345 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 MYL6P5-201ENST00000412707 459 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AC245060.4-201ENST00000413293 1121 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 CBX1P3-201ENST00000413296 527 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.01□□□□□ -1.45
SMAD6O43541 MTCYBP32-201ENST00000427945 1084 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 H3F3BP1-201ENST00000440551 403 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC016724.1-201ENST00000453215 421 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AP000547.1-201ENST00000454360 617 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AL035690.1-201ENST00000490892 383 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AC118282.1-201ENST00000506408 765 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 RN7SKP157-201ENST00000516174 282 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.01□□□□□ -1.45
SMAD6O43541 AP001804.1-201ENST00000526868 919 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC008521.2-201ENST00000591021 259 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC009948.4-201ENST00000604692 675 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.01□□□□□ -1.45
SMAD6O43541 AC022919.1-201ENST00000624979 626 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 OR11H2-202ENST00000641517 1085 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SMAD6O43541 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 MSL3P1-202ENST00000440028 1468 ntBASIC6.01□□□□□ -1.45
SMAD6O43541 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SMAD6O43541 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
SMAD6O43541 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SMAD6O43541 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMAD6O43541 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.01□□□□□ -1.45
SMAD6O43541 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6□□□□□ -1.45
SMAD6O43541 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SMAD6O43541 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6□□□□□ -1.45
SMAD6O43541 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SMAD6O43541 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6□□□□□ -1.45
SMAD6O43541 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6□□□□□ -1.45
SMAD6O43541 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6□□□□□ -1.45
SMAD6O43541 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6□□□□□ -1.45
SMAD6O43541 MTATP6P17-201ENST00000431030 672 ntBASIC6□□□□□ -1.45
SMAD6O43541 CUBNP2-201ENST00000443534 1139 ntBASIC6□□□□□ -1.45
SMAD6O43541 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6□□□□□ -1.45
SMAD6O43541 AC093166.4-201ENST00000457867 318 ntBASIC6□□□□□ -1.45
SMAD6O43541 AC007998.1-201ENST00000474156 672 ntBASIC6□□□□□ -1.45
SMAD6O43541 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6□□□□□ -1.45
SMAD6O43541 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6□□□□□ -1.45
SMAD6O43541 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6□□□□□ -1.45
SMAD6O43541 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6□□□□□ -1.45
SMAD6O43541 ZNF322P1-201ENST00000568013 1209 ntBASIC6□□□□□ -1.45
SMAD6O43541 GARSP1-201ENST00000570895 719 ntBASIC6□□□□□ -1.45
SMAD6O43541 TXNP4-201ENST00000575018 310 ntBASIC6□□□□□ -1.45
SMAD6O43541 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6□□□□□ -1.45
SMAD6O43541 AC109809.1-201ENST00000619665 545 ntBASIC6□□□□□ -1.45
SMAD6O43541 OR8G3P-202ENST00000641572 1255 ntBASIC6□□□□□ -1.45
SMAD6O43541 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SMAD6O43541 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SMAD6O43541 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SMAD6O43541 AL022323.4-201ENST00000623980 13120 ntBASIC6□□□□□ -1.45
SMAD6O43541 TTC41P-205ENST00000551270 3963 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.99□□□□□ -1.45
SMAD6O43541 WDR95P-201ENST00000425638 1542 ntBASIC5.99□□□□□ -1.45
SMAD6O43541 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.99□□□□□ -1.45
SMAD6O43541 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms