Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 AL356057.1-202ENST00000402263 756 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM38O00635 MTND2P21-201ENST00000436242 1042 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 DNAJC19P5-201ENST00000443295 316 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 PPIAP20-201ENST00000449839 135 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 SLC25A51P1-201ENST00000468432 871 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 RPL23AP64-201ENST00000469465 435 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 SNORA81.2-201ENST00000516868 170 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM38O00635 IGKV3D-25-201ENST00000519599 235 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC027369.2-201ENST00000528030 440 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM38O00635 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AL357094.1-201ENST00000603845 844 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AL096712.1-201ENST00000614561 159 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 AC025016.1-201ENST00000616746 682 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM38O00635 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM38O00635 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 AC074141.1-201ENST00000588129 2995 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM38O00635 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM38O00635 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM38O00635 RANP4-201ENST00000413361 655 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 RPL23AP85-201ENST00000421838 433 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC242426.1-201ENST00000435270 960 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM38O00635 BX679664.2-201ENST00000439282 283 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 VN1R38P-201ENST00000450265 887 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 RPSAP39-201ENST00000467439 883 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 RPL12P31-201ENST00000478433 450 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC114322.1-201ENST00000506771 926 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AC095052.1-201ENST00000509955 863 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 TRIM77BP-201ENST00000524985 1119 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 OR4A46P-201ENST00000527255 933 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM38O00635 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC125612.1-201ENST00000547580 377 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC233702.7-202ENST00000582941 211 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC242628.1-201ENST00000606810 391 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms