Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RN7SL649P-201ENST00000496974 275 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 AC025458.1-201ENST00000506046 166 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 OR5H7P-201ENST00000514084 930 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 AC021146.10-201ENST00000515628 706 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 Y_RNA.667-201ENST00000516212 107 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 RNA5SP438-201ENST00000516561 112 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.43□□□□□ -1.54
UPK1AO00322 AP000619.2-201ENST00000546014 969 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.43□□□□□ -1.54
UPK1AO00322 AL356801.1-201ENST00000559320 294 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.43□□□□□ -1.54
UPK1AO00322 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.43□□□□□ -1.54
UPK1AO00322 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.43□□□□□ -1.54
UPK1AO00322 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 PDZK1P1-202ENST00000425209 1350 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UPK1AO00322 TMSB4XP2-201ENST00000335179 210 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 RNA5SP500-201ENST00000364486 119 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 RN7SKP81-201ENST00000365603 331 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 AC099535.1-201ENST00000408928 371 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 AL136231.1-201ENST00000429407 730 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 EIF5AP4-201ENST00000441206 465 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.42□□□□□ -1.54
UPK1AO00322 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 AC105384.2-201ENST00000508433 640 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 OR5D2P-201ENST00000524390 911 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.42□□□□□ -1.54
UPK1AO00322 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.42□□□□□ -1.54
UPK1AO00322 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.42□□□□□ -1.54
UPK1AO00322 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.42□□□□□ -1.54
UPK1AO00322 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.42□□□□□ -1.54
UPK1AO00322 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.42□□□□□ -1.54
UPK1AO00322 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.42□□□□□ -1.54
UPK1AO00322 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 AC020656.2-201ENST00000613291 5309 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
UPK1AO00322 AC117409.1-201ENST00000470499 1310 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 AC137056.2-201ENST00000624055 1958 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 UGT2B24P-201ENST00000514441 1597 ntBASIC5.42□□□□□ -1.54
UPK1AO00322 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPK1AO00322 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.41□□□□□ -1.54
UPK1AO00322 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.41□□□□□ -1.54
UPK1AO00322 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.41□□□□□ -1.54
UPK1AO00322 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPK1AO00322 RNA5SP433-201ENST00000364491 114 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 MRPL53P1-201ENST00000414323 319 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 RNGTTP1-201ENST00000420965 728 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 AC019205.1-201ENST00000421830 730 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 AC009784.1-201ENST00000426484 460 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.41□□□□□ -1.54
UPK1AO00322 GAPDHP48-201ENST00000436626 961 ntBASIC5.41□□□□□ -1.54
UPK1AO00322 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.41□□□□□ -1.54
UPK1AO00322 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.41□□□□□ -1.54
UPK1AO00322 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.41□□□□□ -1.54
UPK1AO00322 NPM1P28-201ENST00000492269 840 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms