Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC026826.3-201ENST00000561747 158 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC245014.3-201ENST00000618589 347 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 RBPJP7-201ENST00000442803 1447 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 RBPJP5-201ENST00000449433 1447 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC006484.1-201ENST00000435086 1884 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC092376.2-201ENST00000622621 4116 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 AC104966.1-201ENST00000467010 1464 ntBASIC4.43□□□□□ -1.7
HLA-DRB4X5D2U9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 QRSL1P1-201ENST00000400977 1540 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 U3.7-201ENST00000363668 216 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AL445928.1-201ENST00000435545 222 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 RPS10P18-201ENST00000442662 495 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 RPS7P3-201ENST00000443360 580 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC068491.1-201ENST00000449539 1241 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 CFL1P4-201ENST00000451536 498 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC008629.2-201ENST00000503783 483 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AL158068.1-201ENST00000506116 616 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 RN7SKP35-201ENST00000517210 151 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC007346.2-201ENST00000564816 892 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AC090236.2-201ENST00000587933 1101 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AP001437.1-201ENST00000608783 456 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AL355974.3-201ENST00000617383 467 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AL445670.1-201ENST00000618889 801 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 AL683826.1-201ENST00000624104 627 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 CASC19-238ENST00000641523 1558 ntBASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DRB4X5D2U9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 RPS2P45-201ENST00000469997 2057 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 RNU1-65P-201ENST00000363919 148 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 MIR130B-202ENST00000385018 82 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 AC016739.1-201ENST00000405359 345 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 RNA5SP431-201ENST00000410312 120 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 METTL15P3-201ENST00000415522 1221 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 RPL12P18-201ENST00000437175 325 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DRB4X5D2U9 AC023271.1-201ENST00000445936 1090 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms