Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC097721.1-201ENST00000427150 1253 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 RPL5P7-201ENST00000444235 813 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 HMGB1P7-201ENST00000450921 612 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 RAB28P2-201ENST00000454299 641 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC104339.1-201ENST00000465478 348 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 SNORA70.11-201ENST00000515987 138 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 SNORA70.13-201ENST00000516116 138 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 IGHV1-14-201ENST00000523391 241 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC113192.3-201ENST00000529152 742 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC084121.1-201ENST00000533882 835 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC068339.2-201ENST00000534395 618 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AC009120.3-201ENST00000563335 499 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 MIR4701-201ENST00000583094 63 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AL360012.1-201ENST00000602813 131 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 RPSAP75-201ENST00000605848 301 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AL080312.2-201ENST00000613001 630 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 AP001052.1-201ENST00000626421 99 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 OR6C71P-202ENST00000641886 1107 ntBASIC6.35□□□□□ -1.39
DKK3Q9UBP4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DKK3Q9UBP4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC005225.5-201ENST00000623547 2225 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC068870.3-201ENST00000625077 2536 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 RNA5SP478-201ENST00000364657 115 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 RNU6-609P-201ENST00000365459 107 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 RN7SKP121-201ENST00000410842 305 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 RN7SKP108-201ENST00000411367 328 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 Z80107.1-201ENST00000436830 412 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC092106.1-201ENST00000444291 373 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL590004.3-202ENST00000445883 451 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 PPIAP20-201ENST00000449839 135 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 MTATP6P14-201ENST00000455189 673 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AP002453.1-201ENST00000492327 668 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AL845552.1-201ENST00000556820 323 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 MIR4443-201ENST00000585052 53 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC015911.5-201ENST00000587076 451 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC013244.3-201ENST00000605614 388 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 AC073869.7-201ENST00000640874 297 ntBASIC6.34□□□□□ -1.39
DKK3Q9UBP4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms