Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RN7SL787P-201ENST00000613000 284 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC087565.3-203ENST00000641018 837 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC130360.2-201ENST00000533477 1556 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC005005.4-201ENST00000623789 16698 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RNA5SP242-201ENST00000364171 118 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RNA5SP394-201ENST00000364216 119 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 HMGB1P20-201ENST00000402555 677 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 OR2W4P-201ENST00000406496 926 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RN7SKP293-201ENST00000411389 296 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 H3F3BP1-201ENST00000440551 403 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC023141.8-201ENST00000442554 208 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC023141.9-201ENST00000458734 412 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RN7SL717P-201ENST00000478343 297 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC022215.1-201ENST00000481770 362 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RN7SKP248-201ENST00000516278 305 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 MIR4260-201ENST00000583107 67 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 AC011504.1-201ENST00000623331 4103 ntBASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CLCF1Q9UBD9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AL022331.1-201ENST00000429025 477 ntBASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 MIR6768-201ENST00000610734 72 ntBASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AC018628.1-201ENST00000624147 3819 ntBASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLCF1Q9UBD9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms