Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 IFIT1P1-201ENST00000400497 1449 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC036108.4-201ENST00000611654 2516 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC074375.1-201ENST00000372993 192 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RPS26P38-201ENST00000414476 348 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AF274573.1-201ENST00000430535 494 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 PYHIN5P-201ENST00000431627 723 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RHEBP1-201ENST00000448647 556 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC108463.1-201ENST00000450258 347 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RFC5P1-201ENST00000454419 874 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 OR52A4P-201ENST00000472867 958 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 NMNAT1P4-201ENST00000505598 840 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 FGF7P4-201ENST00000509595 295 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AP000435.1-201ENST00000528539 496 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 HNRNPCP8-201ENST00000528764 888 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 ARL2BPP2-201ENST00000550907 489 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC142086.3-201ENST00000563896 802 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RPL35AP25-201ENST00000584631 330 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC068790.7-201ENST00000602347 528 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC012065.4-201ENST00000602445 679 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC010719.1-201ENST00000602992 747 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 SEPT7P9-203ENST00000604116 343 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC087623.4-201ENST00000606593 695 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AL158196.1-201ENST00000616786 434 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RPL23AP61-201ENST00000623642 466 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC016930.1-201ENST00000468766 2205 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AP002364.1-201ENST00000623330 3386 ntBASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUEDC1Q9NWM3 AC073342.2-201ENST00000595842 1800 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms