Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 SNORD116-1-201ENST00000384335 95 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RN7SKP182-201ENST00000410772 298 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RNF19BPX-201ENST00000426224 625 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AL355355.1-201ENST00000442900 793 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 VN1R25P-201ENST00000443385 738 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AL161636.2-201ENST00000445179 927 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC135999.1-201ENST00000478962 479 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 OR9N1P-202ENST00000494289 481 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RNA5SP271-201ENST00000516700 88 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RNA5SP340-201ENST00000517132 107 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 OR56A7P-201ENST00000524865 941 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC007346.1-201ENST00000569208 867 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AP000919.1-202ENST00000581139 1264 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC013244.1-201ENST00000604279 193 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC087752.4-201ENST00000605911 462 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MIR1264-201ENST00000616374 69 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC126175.1-201ENST00000617041 758 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MIR6826-201ENST00000617808 98 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 TCP1P3-201ENST00000414406 1498 ntBASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC005332.9-201ENST00000620266 2921 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 RNU6-906P-201ENST00000384700 70 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AL355615.1-201ENST00000406187 641 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AL023284.3-201ENST00000407767 334 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 RN7SKP281-201ENST00000410472 352 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 RNU4-27P-201ENST00000410889 139 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 LIPT1P1-201ENST00000415870 1186 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 NIFKP3-201ENST00000417799 865 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 MTND2P18-201ENST00000419962 1030 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AL606495.1-201ENST00000422100 813 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms