Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AL139099.4-201ENST00000614802 114 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC136428.4-201ENST00000634254 1155 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 ZNF969P-201ENST00000510345 2341 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 RNA5SP131-201ENST00000365452 119 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 RN7SKP151-201ENST00000410230 316 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 Z84478.1-201ENST00000438230 1219 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC019185.1-201ENST00000442718 389 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 YWHAEP1-201ENST00000453697 763 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 RPS27AP2-201ENST00000457576 465 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 MRPS16P1-201ENST00000523462 412 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC022404.1-201ENST00000555320 273 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 OR7E18P-201ENST00000592589 702 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AL390318.1-201ENST00000624564 687 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 MAPK10-350ENST00000641777 965 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 LINC02019-201ENST00000608605 2060 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 AC027279.4-201ENST00000624371 2072 ntBASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KIAA1549Q9HCM3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RPL23AP17-201ENST00000401064 499 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 DEFA9P-201ENST00000433042 285 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 MEMO1P4-201ENST00000453590 386 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AP000547.1-201ENST00000454360 617 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC109481.1-201ENST00000509173 282 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 TOMM22P4-201ENST00000511318 336 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC074087.1-201ENST00000512059 724 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 TPM3P3-201ENST00000521343 354 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 MIR4443-201ENST00000585052 53 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC025574.2-201ENST00000615621 514 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC232271.1-201ENST00000602455 2715 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 YES1P1-201ENST00000418510 1628 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 RNA5SP132-201ENST00000364725 118 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms