Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL008723.3-201ENST00000608926 449 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC004477.3-201ENST00000614061 590 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 MIR7854-201ENST00000620068 65 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC024884.1-201ENST00000620583 399 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC022726.2-201ENST00000634673 547 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC003985.2-201ENST00000562268 1669 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
TRIM4Q9C037 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 SNORA74A-201ENST00000364089 198 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 NIPA2P1-201ENST00000426223 976 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 GAPDHP14-201ENST00000450472 937 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 RPS27AP3-201ENST00000453803 454 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 RN7SL610P-201ENST00000463845 291 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC098847.1-201ENST00000473094 348 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 RN7SL717P-201ENST00000478343 297 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC018645.1-201ENST00000505003 109 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 IGKV1D-22-201ENST00000518953 324 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 MRPS21P8-201ENST00000569196 235 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC027216.1-201ENST00000577726 685 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 MIR3189-201ENST00000578735 73 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AL353684.1-201ENST00000622677 1120 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AL132640.3-201ENST00000630473 177 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 MTCO1P28-201ENST00000574177 1528 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM4Q9C037 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM4Q9C037 CASC19-246ENST00000641625 1606 ntBASIC6.02□□□□□ -1.45
TRIM4Q9C037 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC005702.3-201ENST00000585345 1447 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 SNORA58B-201ENST00000364259 136 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 RN7SKP281-201ENST00000410472 352 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AL513325.1-201ENST00000417716 1034 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 HMGN2P27-201ENST00000427352 270 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 RPS27AP6-201ENST00000427962 448 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 RPL5P25-201ENST00000441148 775 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AL022237.1-201ENST00000446663 358 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM4Q9C037 OSTCP1-201ENST00000455507 450 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC103563.5-201ENST00000455643 364 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AL022319.1-201ENST00000458183 1167 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC026348.1-201ENST00000462549 1053 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AL035690.1-201ENST00000490892 383 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 ST13P12-201ENST00000508958 1094 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 RNA5SP418-201ENST00000515951 117 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 RPL3P13-201ENST00000550415 216 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC068305.2-201ENST00000550567 1205 ntBASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM4Q9C037 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms