Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC015983.1-201ENST00000441577 373 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC023141.8-201ENST00000442554 208 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 RBMY2AP-201ENST00000445405 1157 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 RBMY2CP-201ENST00000448575 1157 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 RBMY2DP-202ENST00000448881 1157 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 RBMY2BP-202ENST00000451071 1156 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC093166.4-201ENST00000457867 318 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC098847.1-201ENST00000473094 348 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 RNA5SP340-201ENST00000517132 107 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 DPPA3P2-202ENST00000557188 1219 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 AC092266.1-201ENST00000610958 165 ntBASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF3BQ9BZI7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC066692.1-201ENST00000421721 457 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC005077.1-201ENST00000449226 375 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 GEMIN2P1-201ENST00000454246 752 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LDHAP1-201ENST00000509421 992 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC022826.1-201ENST00000519383 805 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AL121594.2-201ENST00000541658 472 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 AC145423.1-201ENST00000605712 336 ntBASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF3BQ9BZI7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 RN7SKP17-201ENST00000411242 351 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 METTL15P3-201ENST00000415522 1221 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 GTF3AP1-201ENST00000416942 1004 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 CST12P-201ENST00000457644 362 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 AC007998.1-201ENST00000474156 672 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 SNORA26.10-201ENST00000516427 141 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 IGKV2-19-201ENST00000518132 283 ntBASIC6.91□□□□□ -1.3
UPF3BQ9BZI7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms