Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC131935.2-201ENST00000623649 1371 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 SNORA22B-201ENST00000383876 138 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 TRBV7-5-201ENST00000390382 345 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 U3.18-201ENST00000390880 216 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 RN7SKP110-201ENST00000410146 285 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL136133.1-201ENST00000413694 376 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 TIMM8AP1-201ENST00000419283 295 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 RPL26P34-201ENST00000431005 451 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 ATP5JP1-201ENST00000431631 322 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC023347.2-201ENST00000433994 462 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 CACYBPP1-201ENST00000438592 684 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL445189.2-201ENST00000447543 259 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 MTCO1P27-201ENST00000448269 226 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 RN7SL630P-201ENST00000483714 297 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 HMGB1P23-201ENST00000518743 568 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 RPL3P13-201ENST00000550415 216 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 CYP4A26P-201ENST00000563017 196 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC005552.1-201ENST00000577556 662 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC010525.2-201ENST00000590920 195 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 DPPA3P3-201ENST00000603842 430 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC010591.1-201ENST00000603941 649 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 CTHRC1P1-201ENST00000605383 469 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 AC008966.2-201ENST00000606157 453 ntBASIC7.65□□□□□ -1.18
USB1Q9BQ65 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
USB1Q9BQ65 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USB1Q9BQ65 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USB1Q9BQ65 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USB1Q9BQ65 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
USB1Q9BQ65 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.65□□□□□ -1.19
USB1Q9BQ65 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC7.65□□□□□ -1.19
USB1Q9BQ65 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.64□□□□□ -1.19
USB1Q9BQ65 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms