Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PKP4Q99569 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 RPL23AP17-201ENST00000401064 499 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AL096711.1-201ENST00000404780 554 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 MYL6P5-201ENST00000412707 459 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 AMYP1-201ENST00000440059 1023 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 CYCSP51-201ENST00000443545 318 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AL445466.1-201ENST00000448432 357 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 MTCYBP14-201ENST00000457471 715 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 RN7SL168P-201ENST00000463821 279 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 RN7SL741P-201ENST00000482473 289 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 RBBP4P1-201ENST00000502424 1276 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 ASNSP4-201ENST00000511103 447 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 SNORD116-30-201ENST00000516468 85 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 RN7SKP238-201ENST00000516483 249 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC110056.1-201ENST00000525759 911 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.83□□□□□ -1.48
PKP4Q99569 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC092451.2-201ENST00000538746 658 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 AC002310.3-201ENST00000569728 723 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 MIR7109-201ENST00000613748 65 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC096708.4-201ENST00000620563 552 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC021422.1-201ENST00000621212 473 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 AC025262.3-201ENST00000623666 360 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PKP4Q99569 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.83□□□□□ -1.48
PKP4Q99569 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
PKP4Q99569 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 UGT2B24P-201ENST00000514441 1597 ntBASIC5.83□□□□□ -1.48
PKP4Q99569 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.83□□□□□ -1.48
PKP4Q99569 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PKP4Q99569 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 RBPJP7-201ENST00000442803 1447 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 RBPJP5-201ENST00000449433 1447 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 THAP12P9-201ENST00000503971 2360 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.82□□□□□ -1.48
PKP4Q99569 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 COX6B1P3-201ENST00000312310 260 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 OR56A4-201ENST00000330728 1209 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RNU6-1331P-201ENST00000363658 106 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RN7SKP187-201ENST00000365536 330 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 SNORA40.4-201ENST00000390971 128 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 OR2W4P-201ENST00000406496 926 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 CASKP1-201ENST00000412870 582 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RPL35AP3-201ENST00000414680 288 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.82□□□□□ -1.48
PKP4Q99569 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.82□□□□□ -1.48
PKP4Q99569 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 AL365220.1-201ENST00000432923 399 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RSL24D1P8-201ENST00000434442 492 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 ATP5LP2-201ENST00000440646 311 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 TAAR4P-201ENST00000454843 1039 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC019084.1-201ENST00000457337 432 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC104164.1-201ENST00000460282 590 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC023194.2-201ENST00000465398 406 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RN7SL269P-201ENST00000467795 305 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 MTND3P6-201ENST00000485242 339 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 NPM1P28-201ENST00000492269 840 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RPL37P23-201ENST00000492641 294 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 MORF4L2P1-201ENST00000503761 858 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.82□□□□□ -1.48
PKP4Q99569 PRMT5P1-201ENST00000514351 598 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 RN7SKP67-201ENST00000515905 235 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 NPM1P52-201ENST00000518264 846 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.82□□□□□ -1.48
PKP4Q99569 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.82□□□□□ -1.48
PKP4Q99569 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.82□□□□□ -1.48
PKP4Q99569 AC078878.1-201ENST00000539832 958 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.82□□□□□ -1.48
PKP4Q99569 EIF1AXP2-201ENST00000555940 413 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms