Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 MIR130A-201ENST00000385274 89 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC068287.1-201ENST00000430283 295 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 KNOP1P3-201ENST00000446933 426 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 RPL26P30-202ENST00000602923 645 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 RNA5SP171-201ENST00000391071 115 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 BMS1P19-201ENST00000433925 393 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 MTND6P2-201ENST00000512226 524 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AP002373.2-201ENST00000541631 1060 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AC009117.1-201ENST00000563948 554 ntBASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 RNU1-24P-201ENST00000364285 165 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC023141.8-201ENST00000442554 208 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 FTH1P25-201ENST00000447665 469 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 VDAC2P4-201ENST00000452925 711 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC111000.3-201ENST00000508057 576 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 snoU13.22-201ENST00000459428 104 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AL035690.1-201ENST00000490892 383 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC004980.4-201ENST00000513375 203 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 CCDC58P3-201ENST00000590792 430 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AL391262.1-201ENST00000556558 1992 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 OR9G4-201ENST00000302957 984 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC211486.3-201ENST00000412694 621 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC090058.1-201ENST00000498788 435 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 RPS4XP20-201ENST00000505751 772 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC091042.1-201ENST00000579213 173 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC090527.3-201ENST00000619041 548 ntBASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CSMD1Q96PZ7 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 ELOCP19-201ENST00000411919 318 ntBASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.65□□□□□ -1.66
CSMD1Q96PZ7 AC015983.1-201ENST00000441577 373 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms