Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR193BHG-214ENST00000641765 509 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 MAPK10-350ENST00000641777 965 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL159987.1-201ENST00000347911 293 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RNA5SP394-201ENST00000364216 119 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 HMGB1P20-201ENST00000402555 677 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 REG1CP-206ENST00000447469 496 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RPL31P15-201ENST00000449770 338 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RSU1P1-201ENST00000453416 441 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 NXT1P1-201ENST00000458481 316 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RN7SL273P-201ENST00000481561 299 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RPS3AP15-201ENST00000483874 781 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RN7SKP67-201ENST00000515905 235 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 CYCSP22-201ENST00000517555 339 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AC021678.3-201ENST00000517893 476 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AC063977.5-201ENST00000601044 974 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AC125494.2-201ENST00000602431 657 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AC103703.1-201ENST00000634783 663 ntBASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ECHDC3Q96DC8 RPS2P45-201ENST00000469997 2057 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC026523.2-201ENST00000625039 7739 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC007842.1-201ENST00000597336 2039 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 SNORA64.1-201ENST00000362600 132 ntBASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.79□□□□□ -1.48
ECHDC3Q96DC8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms