Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 HMGN2P25-201ENST00000486956 268 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AP005202.1-201ENST00000489915 867 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RNU6-1281P-201ENST00000516223 105 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 HPRT1P3-201ENST00000539521 576 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC093027.1-201ENST00000546698 429 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.14□□□□□ -1.11
HLA-CQ95604 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RN7SL426P-201ENST00000579106 295 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AC116312.1-201ENST00000606841 314 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AL049541.2-201ENST00000626377 555 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC010653.3-201ENST00000635332 232 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 MKKS-204ENST00000639674 192 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 MAPK10-260ENST00000641047 2546 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.14□□□□□ -1.11
HLA-CQ95604 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC112255.1-201ENST00000624070 2493 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HLA-CQ95604 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 KYNUP1-201ENST00000466683 1406 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-CQ95604 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 RPL23AP29-201ENST00000397284 453 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 U3.38-201ENST00000408534 216 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC062016.2-201ENST00000420950 676 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 PIGFP2-201ENST00000421400 651 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 RIMKLBP2-201ENST00000424737 654 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC002486.1-201ENST00000435098 391 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 FTH1P16-201ENST00000435241 552 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AL512882.1-201ENST00000436086 832 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC015983.1-201ENST00000441577 373 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 YWHAQP9-201ENST00000445891 512 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 GAPDHP17-201ENST00000449858 1001 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 GOT2P2-201ENST00000450663 1251 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 DNAJC19P8-201ENST00000452887 259 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 BX248409.1-201ENST00000455497 255 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC234782.3-201ENST00000461229 433 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC091564.1-201ENST00000464563 479 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 ACTR3P3-201ENST00000480448 893 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 THAP6-203ENST00000502620 582 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 PSMA2P2-201ENST00000504319 686 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC022690.1-201ENST00000526681 550 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC068305.2-201ENST00000550567 1205 ntBASIC8.13□□□□□ -1.11
HLA-CQ95604 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-CQ95604 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 577.9 ms