Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.5□□□□□ -1.53
PTP4A1Q93096 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTP4A1Q93096 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 SOCS5P1-201ENST00000440415 949 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 RPL12P49-201ENST00000441100 121 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC234771.2-201ENST00000445718 597 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AL162739.1-201ENST00000450606 307 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 RPS7P10-201ENST00000464254 603 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 OR4D12P-201ENST00000509361 911 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC138517.1-201ENST00000515724 568 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC135983.3-201ENST00000528049 1226 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC244502.2-201ENST00000543361 851 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 MTATP6P25-201ENST00000574491 261 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 WBP1LP11-201ENST00000586141 328 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC026898.1-201ENST00000586404 571 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC005479.3-201ENST00000602790 431 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC141002.1-201ENST00000607025 279 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 RN7SL261P-201ENST00000613441 282 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 AC092159.4-201ENST00000624944 550 ntBASIC5.49□□□□□ -1.53
PTP4A1Q93096 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
PTP4A1Q93096 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTP4A1Q93096 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 NXF4-202ENST00000416098 1465 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AL157702.1-201ENST00000398764 426 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AL607077.1-201ENST00000401718 499 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AL035696.2-201ENST00000407941 709 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC002127.1-201ENST00000421305 225 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 OR6K4P-201ENST00000423179 955 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AL590399.2-201ENST00000427536 309 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 RPS3AP38-201ENST00000435889 763 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 EMC3-AS1-205ENST00000438698 534 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms