Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ABCA11P-202ENST00000504019 2110 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC073342.2-201ENST00000595842 1800 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 WDR95P-201ENST00000425638 1542 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL356057.1-202ENST00000402263 756 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL356968.2-201ENST00000412769 1257 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL096829.1-201ENST00000413677 457 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL354890.1-201ENST00000413730 346 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 GTF3AP1-201ENST00000416942 1004 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL513325.1-201ENST00000417716 1034 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC245884.2-201ENST00000426257 404 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 BX119321.1-201ENST00000428912 797 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 VN1R110P-201ENST00000438988 971 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 DNAJC19P5-201ENST00000443295 316 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC009963.4-201ENST00000448535 339 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL445665.1-202ENST00000452436 324 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 YWHAEP1-201ENST00000453697 763 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC023141.9-201ENST00000458734 412 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 RPSAP37-201ENST00000470913 821 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 STRADBP1-201ENST00000478954 1281 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL121579.2-201ENST00000555466 590 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 MIR4776-2-201ENST00000580204 80 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 BNIP3P19-201ENST00000605397 577 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AL512624.1-201ENST00000613638 469 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 MIR6826-201ENST00000617808 98 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC079298.2-201ENST00000623885 459 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 OR7A1P-202ENST00000641542 1158 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC092724.1-201ENST00000624623 3397 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC106872.5-201ENST00000508856 1416 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGB4Q8WW32 AC024587.1-201ENST00000505925 2157 ntBASIC6.16□□□□□ -1.42
HMGB4Q8WW32 ICE2P1-201ENST00000512800 1849 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 MAPK10-344ENST00000641718 3746 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC119674.1-202ENST00000641333 1860 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 UGT2B27P-201ENST00000505092 1620 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC062029.1-202ENST00000606164 3651 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC090220.1-201ENST00000593078 1699 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OR11H13P-201ENST00000359695 979 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 U3.25-201ENST00000391209 220 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AL096711.1-201ENST00000404780 554 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC019205.1-201ENST00000421830 730 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 GAPDHP75-201ENST00000433910 943 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC064862.4-201ENST00000442180 334 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC011742.2-201ENST00000443818 352 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AL445466.1-201ENST00000448432 357 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC092967.1-201ENST00000449016 481 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms