Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 LINC02035-201ENST00000610128 5476 ntBASIC6.92□□□□□ -1.3
SNED1Q8TER0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AL645733.1-201ENST00000402250 217 ntBASIC6.92□□□□□ -1.3
SNED1Q8TER0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 RPL7P6-201ENST00000480903 738 ntBASIC6.92□□□□□ -1.3
SNED1Q8TER0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 MIR2117-201ENST00000516780 80 ntBASIC6.92□□□□□ -1.3
SNED1Q8TER0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AC090527.3-201ENST00000619041 548 ntBASIC6.92□□□□□ -1.3
SNED1Q8TER0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNED1Q8TER0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNED1Q8TER0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 RPL37P18-201ENST00000411602 243 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 HIGD1AP8-201ENST00000453927 274 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 AL389915.2-201ENST00000454576 441 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 RN7SL51P-201ENST00000468230 285 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 RN7SKP288-201ENST00000516227 268 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 IGLV3-24-201ENST00000517477 197 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 AL049779.3-201ENST00000557141 606 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 AL662795.2-201ENST00000624252 3706 ntBASIC6.91□□□□□ -1.3
SNED1Q8TER0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
SNED1Q8TER0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNED1Q8TER0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
SNED1Q8TER0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SNED1Q8TER0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.9□□□□□ -1.3
SNED1Q8TER0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNED1Q8TER0 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.9□□□□□ -1.3
SNED1Q8TER0 AC112255.1-201ENST00000624070 2493 ntBASIC6.9□□□□□ -1.3
SNED1Q8TER0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNED1Q8TER0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNED1Q8TER0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNED1Q8TER0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 SNORA70H-201ENST00000383910 135 ntBASIC6.9□□□□□ -1.31
SNED1Q8TER0 SNORA70J-201ENST00000384182 135 ntBASIC6.9□□□□□ -1.31
SNED1Q8TER0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 AC096775.1-201ENST00000437724 448 ntBASIC6.9□□□□□ -1.31
SNED1Q8TER0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 RPL17P2-201ENST00000491913 451 ntBASIC6.9□□□□□ -1.31
SNED1Q8TER0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.9□□□□□ -1.31
SNED1Q8TER0 RNA5SP228-201ENST00000516232 133 ntBASIC6.9□□□□□ -1.31
SNED1Q8TER0 RN7SKP66-201ENST00000516681 231 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms