Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC092718.4-201ENST00000566639 716 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AC024267.2-201ENST00000582737 417 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 MTCO2P22-201ENST00000603246 681 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 BUB1P1-201ENST00000603541 607 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AC093635.1-201ENST00000609028 555 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AP002967.1-201ENST00000624203 539 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AC092159.4-201ENST00000624944 550 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 SNX18P10-201ENST00000625014 519 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 AL513185.3-201ENST00000433335 1300 ntBASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SIMC1Q8NDZ2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC132825.1-201ENST00000463573 2247 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RNU6-729P-201ENST00000384399 107 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RNU6-1263P-201ENST00000384601 106 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RNU11-201ENST00000387069 134 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 TAS2R15P-201ENST00000390674 928 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC092642.1-201ENST00000392417 425 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MTCO2P31-201ENST00000402702 684 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RPL5P20-201ENST00000403848 896 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AL139415.1-201ENST00000424862 352 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ZNF965P-201ENST00000432501 817 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC092106.2-201ENST00000436597 487 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC006326.1-201ENST00000445465 787 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC093166.2-201ENST00000455969 1017 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RN7SL83P-201ENST00000468131 297 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC091544.1-201ENST00000484702 348 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MTCYBP35-201ENST00000503630 1137 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 SNORA58-201ENST00000505219 137 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC093664.1-201ENST00000511779 289 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RNA5SP318-201ENST00000516352 92 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC008429.2-201ENST00000523057 864 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OR52K3P-201ENST00000531655 943 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OR9G2P-201ENST00000533326 880 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AP001496.3-201ENST00000580230 913 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ZNF92P3-201ENST00000596594 954 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AL360012.1-201ENST00000602813 131 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC019131.2-201ENST00000609071 870 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC004241.2-201ENST00000614562 444 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MIR6778-201ENST00000617912 73 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC114546.4-201ENST00000624413 369 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC103703.1-201ENST00000634783 663 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OR5AC4P-202ENST00000642086 985 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC006511.3-201ENST00000624929 1783 ntBASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.13□□□□□ -1.43
SIMC1Q8NDZ2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms