Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HSPD1P11-201ENST00000508643 1702 ntBASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM48Q8IWZ4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AP005139.1-201ENST00000580702 1647 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 SNORA38B-201ENST00000363524 131 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 RPL7P27-201ENST00000403775 720 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 RN7SKP271-201ENST00000410528 320 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 MTND4P3-201ENST00000417829 541 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 USP9YP26-201ENST00000421008 661 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 RPS7P12-201ENST00000422385 582 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC046176.1-201ENST00000435260 1170 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 MUPP-201ENST00000438111 566 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC092685.1-201ENST00000447960 1243 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC074087.1-201ENST00000512059 724 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC092593.2-201ENST00000513866 913 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 Vault.2-201ENST00000516519 98 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 MTND2P26-201ENST00000528255 1029 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC087897.1-201ENST00000550134 156 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 DPPA3P2-201ENST00000553589 478 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC023813.2-201ENST00000564321 469 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 CYCSP1-201ENST00000604815 315 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC067838.1-201ENST00000606064 577 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 TUSC7.1-201ENST00000610969 165 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 AC110716.2-201ENST00000563865 3945 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 SMG1P5-202ENST00000529428 4219 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 SMG1P2-201ENST00000566127 4221 ntBASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM48Q8IWZ4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 MARK2P4-201ENST00000503381 2380 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NEK2P4-201ENST00000425793 1329 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AP000866.6-201ENST00000638898 3579 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 SNORD116-9-201ENST00000384000 95 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 SNORD116-3-201ENST00000384287 95 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 SNORD116-7-201ENST00000384404 95 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms