Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 RPSAP37-201ENST00000470913 821 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC093719.1-201ENST00000480427 441 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 SCARNA21.2-201ENST00000516600 166 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AP000648.1-201ENST00000529682 397 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC125494.2-201ENST00000602431 657 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AL031601.1-201ENST00000605702 394 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 MIR6809-201ENST00000612189 116 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC126175.1-201ENST00000617041 758 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC024587.1-201ENST00000505925 2157 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC109446.4-201ENST00000623235 2755 ntBASIC5.66□□□□□ -1.5
RAB43Q86YS6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAB43Q86YS6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.66□□□□□ -1.5
RAB43Q86YS6 AC140479.2-201ENST00000421567 3130 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC106872.5-201ENST00000508856 1416 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 RNA5SP453-201ENST00000362503 119 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC005522.1-201ENST00000395416 346 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 AL121977.1-201ENST00000401636 979 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 SNRPEP6-201ENST00000407465 277 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 RN7SKP286-201ENST00000410894 299 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 SDHDP6-201ENST00000414693 480 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC023245.1-201ENST00000468501 517 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 OR5D2P-201ENST00000524390 911 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 PCNAP4-201ENST00000532690 730 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 FAM27E4-201ENST00000605259 342 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAB43Q86YS6 OR8G3P-202ENST00000641572 1255 ntBASIC5.65□□□□□ -1.5
RAB43Q86YS6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAB43Q86YS6 AP001541.1-201ENST00000623322 1904 ntBASIC5.65□□□□□ -1.51
RAB43Q86YS6 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.51
RAB43Q86YS6 NEPNP-201ENST00000404786 1371 ntBASIC5.65□□□□□ -1.51
RAB43Q86YS6 USP9YP3-201ENST00000434481 1766 ntBASIC5.65□□□□□ -1.51
RAB43Q86YS6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.65□□□□□ -1.51
RAB43Q86YS6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 GTF2IP4-201ENST00000453092 2054 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 SNORA51.1-201ENST00000363243 140 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC016739.1-201ENST00000405359 345 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC245060.4-201ENST00000413293 1121 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms