Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 QRSL1P1-201ENST00000400977 1540 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDK5Q00535 PEX12P1-201ENST00000400284 1048 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 NIFKP3-201ENST00000417799 865 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 AC117434.1-201ENST00000419971 836 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK5Q00535 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDK5Q00535 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC079064.1-201ENST00000528365 362 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK5Q00535 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK5Q00535 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 MT1CP-201ENST00000567054 174 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.14□□□□□ -1.59
CDK5Q00535 AL078601.3-201ENST00000573303 535 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC009237.13-201ENST00000603193 276 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 MIR6823-201ENST00000622118 61 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 AL357140.4-201ENST00000636827 412 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.14□□□□□ -1.59
CDK5Q00535 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.14□□□□□ -1.59
CDK5Q00535 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDK5Q00535 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.14□□□□□ -1.59
CDK5Q00535 AC004158.1-201ENST00000564508 4319 ntBASIC5.14□□□□□ -1.59
CDK5Q00535 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC018809.2-201ENST00000602436 3823 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
CDK5Q00535 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5Q00535 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5Q00535 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5Q00535 SEPT7P2-202ENST00000398921 823 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 DPPA2P2-201ENST00000418220 897 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5Q00535 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 TUBB4BP6-201ENST00000437576 479 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 NANOGP9-201ENST00000439890 892 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 CBX1P2-201ENST00000453841 458 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 PSAT1P4-201ENST00000466500 526 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5Q00535 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 GAPDHP71-201ENST00000511530 1003 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 AP001284.1-201ENST00000528393 2118 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5Q00535 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC019322.1-201ENST00000571869 389 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5Q00535 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5Q00535 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 AC079097.1-201ENST00000512187 1399 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5Q00535 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5Q00535 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5Q00535 AC068870.1-201ENST00000563737 2455 ntBASIC5.13□□□□□ -1.59
CDK5Q00535 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5Q00535 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5Q00535 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5Q00535 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms