Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 SNORA81.2-201ENST00000516868 170 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.16□□□□□ -1.26
RHBDL3P58872 OR4A40P-201ENST00000533878 948 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 AP005131.7-201ENST00000610087 611 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 AC003001.2-201ENST00000616294 831 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 LINC00216-201ENST00000623548 1126 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 AC116667.2-201ENST00000641075 823 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 AC106872.5-201ENST00000508856 1416 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 UGT2B24P-201ENST00000514441 1597 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 HSPD1P7-201ENST00000447985 1686 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 RAD17P2-201ENST00000451754 1977 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.15□□□□□ -1.26
RHBDL3P58872 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RHBDL3P58872 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 OR10R3P-201ENST00000361688 942 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 RNA5SP242-201ENST00000364171 118 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC016739.1-201ENST00000405359 345 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 GABARAPL3-201ENST00000412799 354 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 NMD3P2-201ENST00000421815 761 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AL606490.7-201ENST00000433136 191 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 ARAFP2-201ENST00000440565 559 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AC064862.4-201ENST00000442180 334 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 RPS7P3-201ENST00000443360 580 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 RPL36AP39-201ENST00000445859 318 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC023141.9-201ENST00000458734 412 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 RN7SL165P-201ENST00000477476 291 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AC093719.1-201ENST00000480427 441 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AC083795.1-201ENST00000491760 320 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.15□□□□□ -1.26
RHBDL3P58872 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC079600.1-201ENST00000550326 297 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC092868.3-201ENST00000560515 784 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 OR4H6P-201ENST00000563771 921 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
RHBDL3P58872 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.15□□□□□ -1.26
RHBDL3P58872 MIMT1-201ENST00000597105 1050 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 WBP1LP8-201ENST00000617401 327 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 AC074276.2-201ENST00000619891 348 ntBASIC7.15□□□□□ -1.26
RHBDL3P58872 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RHBDL3P58872 WDR95P-201ENST00000425638 1542 ntBASIC7.15□□□□□ -1.27
RHBDL3P58872 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RHBDL3P58872 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.15□□□□□ -1.27
RHBDL3P58872 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RHBDL3P58872 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.15□□□□□ -1.27
RHBDL3P58872 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RHBDL3P58872 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
RHBDL3P58872 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
RHBDL3P58872 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RHBDL3P58872 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RHBDL3P58872 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RHBDL3P58872 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.14□□□□□ -1.27
RHBDL3P58872 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
RHBDL3P58872 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 NEPNP-201ENST00000404786 1371 ntBASIC7.14□□□□□ -1.27
RHBDL3P58872 RPS3AP2-201ENST00000407190 754 ntBASIC7.14□□□□□ -1.27
RHBDL3P58872 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RHBDL3P58872 RNA5SP178-201ENST00000410380 128 ntBASIC7.14□□□□□ -1.27
RHBDL3P58872 RN7SKP229-201ENST00000410465 302 ntBASIC7.14□□□□□ -1.27
RHBDL3P58872 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.14□□□□□ -1.27
RHBDL3P58872 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.14□□□□□ -1.27
RHBDL3P58872 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.14□□□□□ -1.27
RHBDL3P58872 CCNT2P1-201ENST00000423082 1315 ntBASIC7.14□□□□□ -1.27
RHBDL3P58872 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.14□□□□□ -1.27
RHBDL3P58872 MGAT2P2-201ENST00000427194 797 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms