Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 RNA5SP188-201ENST00000362916 129 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 RNU6-236P-201ENST00000363886 106 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 Y_RNA.472-201ENST00000384322 102 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLRN1P58418 Y_RNA.578-201ENST00000390903 88 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 MCTS2P-201ENST00000394552 546 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AL136310.1-201ENST00000404926 654 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 MIR1302-8-201ENST00000408342 128 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 AL929472.1-201ENST00000417484 429 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 PTGES3P1-201ENST00000439531 483 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 AL845321.1-201ENST00000444603 348 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 TVP23CP1-201ENST00000450317 639 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 AC005410.1-202ENST00000460347 485 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 RPL5P13-201ENST00000462840 709 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLRN1P58418 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC118282.2-201ENST00000508739 374 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 OR52H2P-201ENST00000514607 902 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 SCARNA11.1-201ENST00000516918 132 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC073581.1-201ENST00000519036 575 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC104417.1-201ENST00000523974 751 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 OR52K3P-201ENST00000531655 943 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AP004607.5-201ENST00000532034 217 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC011611.5-201ENST00000552477 578 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.88□□□□□ -1.47
CLRN1P58418 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC109446.2-201ENST00000567872 497 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 MIR378H-201ENST00000579966 83 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC069366.1-201ENST00000583159 838 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AL078623.1-201ENST00000602702 907 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC091133.5-201ENST00000603088 301 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 BUB1P1-201ENST00000603541 607 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC010975.3-201ENST00000618727 978 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AL121895.2-201ENST00000619558 447 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 MIR7854-201ENST00000620068 65 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 Z98755.1-201ENST00000407015 1384 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CLRN1P58418 API5P1-201ENST00000424316 1510 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.88□□□□□ -1.47
CLRN1P58418 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
CLRN1P58418 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 AC023245.2-201ENST00000530760 2978 ntBASIC5.88□□□□□ -1.47
CLRN1P58418 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLRN1P58418 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 RN7SKP191-201ENST00000364713 306 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 RPS26P13-201ENST00000419030 330 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms