Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC245060.4-201ENST00000413293 1121 ntBASIC5.47□□□□□ -1.53
LIM2P55344 RPS21P8-201ENST00000413365 247 ntBASIC5.47□□□□□ -1.53
LIM2P55344 SLC20A1P1-201ENST00000413906 956 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AK4P4-201ENST00000419465 646 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.47□□□□□ -1.53
LIM2P55344 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 GAPDHP48-201ENST00000436626 961 ntBASIC5.47□□□□□ -1.53
LIM2P55344 RPS10P18-201ENST00000442662 495 ntBASIC5.47□□□□□ -1.53
LIM2P55344 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.47□□□□□ -1.53
LIM2P55344 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.47□□□□□ -1.53
LIM2P55344 AP006222.1-205ENST00000450734 457 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AC011476.1-201ENST00000466725 307 ntBASIC5.47□□□□□ -1.53
LIM2P55344 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.47□□□□□ -1.53
LIM2P55344 RPL5P12-201ENST00000477071 851 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.47□□□□□ -1.53
LIM2P55344 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
LIM2P55344 ADAM3B-201ENST00000569937 840 ntBASIC5.47□□□□□ -1.53
LIM2P55344 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 AL513327.3-201ENST00000602618 469 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AL360012.1-201ENST00000602813 131 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AL049840.6-201ENST00000604583 345 ntBASIC5.47□□□□□ -1.53
LIM2P55344 AL133481.2-203ENST00000607558 139 ntBASIC5.47□□□□□ -1.53
LIM2P55344 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.47□□□□□ -1.53
LIM2P55344 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 AC022919.1-201ENST00000624979 626 ntBASIC5.47□□□□□ -1.53
LIM2P55344 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.47□□□□□ -1.53
LIM2P55344 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.47□□□□□ -1.53
LIM2P55344 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LIM2P55344 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LIM2P55344 AC140479.2-201ENST00000421567 3130 ntBASIC5.47□□□□□ -1.53
LIM2P55344 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIM2P55344 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.53
LIM2P55344 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
LIM2P55344 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.46□□□□□ -1.53
LIM2P55344 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.46□□□□□ -1.53
LIM2P55344 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
LIM2P55344 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 NEPNP-201ENST00000404786 1371 ntBASIC5.46□□□□□ -1.54
LIM2P55344 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LIM2P55344 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 OR52B3P-201ENST00000314715 928 ntBASIC5.46□□□□□ -1.54
LIM2P55344 RNA5SP514-201ENST00000363717 111 ntBASIC5.46□□□□□ -1.54
LIM2P55344 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LIM2P55344 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 METTL15P3-201ENST00000415522 1221 ntBASIC5.46□□□□□ -1.54
LIM2P55344 KCTD9P1-201ENST00000430462 1167 ntBASIC5.46□□□□□ -1.54
LIM2P55344 OR7E116P-201ENST00000448529 957 ntBASIC5.46□□□□□ -1.54
LIM2P55344 RPS17P15-201ENST00000475609 349 ntBASIC5.46□□□□□ -1.54
LIM2P55344 PDCL3P4-201ENST00000489621 720 ntBASIC5.46□□□□□ -1.54
LIM2P55344 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 AC139365.2-201ENST00000517972 253 ntBASIC5.46□□□□□ -1.54
LIM2P55344 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.46□□□□□ -1.54
LIM2P55344 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.46□□□□□ -1.54
LIM2P55344 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.46□□□□□ -1.54
LIM2P55344 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.46□□□□□ -1.54
LIM2P55344 DPPA3P2-202ENST00000557188 1219 ntBASIC5.46□□□□□ -1.54
LIM2P55344 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.46□□□□□ -1.54
LIM2P55344 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.46□□□□□ -1.54
LIM2P55344 AC140134.1-201ENST00000511830 3544 ntBASIC5.46□□□□□ -1.54
LIM2P55344 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LIM2P55344 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 AC027279.4-201ENST00000624371 2072 ntBASIC5.46□□□□□ -1.54
LIM2P55344 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LIM2P55344 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIM2P55344 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LIM2P55344 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LIM2P55344 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
LIM2P55344 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LIM2P55344 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.45□□□□□ -1.54
LIM2P55344 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.45□□□□□ -1.54
LIM2P55344 MIR1282-201ENST00000408865 101 ntBASIC5.45□□□□□ -1.54
LIM2P55344 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.45□□□□□ -1.54
LIM2P55344 RPS3P2-201ENST00000421346 701 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AKR1B10P1-201ENST00000425765 942 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AL121578.1-201ENST00000428051 892 ntBASIC5.45□□□□□ -1.54
LIM2P55344 AC002069.1-201ENST00000429649 1159 ntBASIC5.45□□□□□ -1.54
LIM2P55344 NPM1P25-201ENST00000429734 854 ntBASIC5.45□□□□□ -1.54
LIM2P55344 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms