Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC134669.1-201ENST00000581275 672 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 AC074141.1-201ENST00000588129 2995 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 AP003465.2-201ENST00000602571 373 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 AL499605.1-201ENST00000604628 403 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL357078.3-201ENST00000607528 618 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL513477.2-201ENST00000607858 568 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC093673.2-201ENST00000609674 331 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL135999.3-201ENST00000610501 812 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 MIR6778-201ENST00000617912 73 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 ENO1P4-201ENST00000416471 1785 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 TATDN2P3-201ENST00000452855 3665 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 RNF19BPY-201ENST00000458209 1550 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 CASC19-238ENST00000641523 1558 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 RAD1P1-201ENST00000231383 813 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
EPHB3P54753 HMGB3P19-201ENST00000403971 560 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 MTCYBP5-201ENST00000423752 1135 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 DLGAP5P1-201ENST00000430307 464 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AC108479.1-201ENST00000431142 427 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AL392003.1-201ENST00000434394 243 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 POU5F1P5-201ENST00000445059 658 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 TRY2P-201ENST00000448860 689 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 GM2AP2-201ENST00000491764 562 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AC116353.3-201ENST00000511215 249 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 MRPS33P3-201ENST00000513456 322 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 HSD3BP3-201ENST00000514706 994 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 MTCYBP41-201ENST00000528913 1123 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.86□□□□□ -1.31
EPHB3P54753 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC010546.1-201ENST00000569391 485 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
EPHB3P54753 BNIP3P30-201ENST00000601184 574 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AL133243.1-201ENST00000614487 366 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 MIR6071-201ENST00000616741 78 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AC025016.1-201ENST00000616746 682 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AL645927.2-201ENST00000618350 349 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AP003499.2-201ENST00000624100 483 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 AC092159.4-201ENST00000624944 550 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 LINC02495-203ENST00000636704 242 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
EPHB3P54753 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
EPHB3P54753 ZNF812P-201ENST00000457674 1694 ntBASIC6.86□□□□□ -1.31
EPHB3P54753 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
EPHB3P54753 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms