Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 AL132875.1-201ENST00000403623 949 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 SNORA79B-201ENST00000410557 148 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 DPPA2P3-201ENST00000411853 655 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.08□□□□□ -1.44
LIMK1P53667 AC006455.6-201ENST00000426192 893 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 RPS7P14-201ENST00000426405 583 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 AC097721.1-201ENST00000427150 1253 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.08□□□□□ -1.44
LIMK1P53667 RNU6-775P-201ENST00000459318 96 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 RPL23AP64-201ENST00000469465 435 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 TRBV8-1-201ENST00000481590 279 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 OR5M14P-201ENST00000506803 618 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.08□□□□□ -1.44
LIMK1P53667 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.08□□□□□ -1.44
LIMK1P53667 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.08□□□□□ -1.44
LIMK1P53667 AP002884.5-201ENST00000595053 1132 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 FO393422.1-201ENST00000603908 708 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 AC079791.1-201ENST00000605356 973 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 AC097467.4-201ENST00000605504 141 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 MIR6748-201ENST00000610433 71 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 AC079395.2-201ENST00000610982 737 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 AC092070.2-203ENST00000598377 3644 ntBASIC6.08□□□□□ -1.44
LIMK1P53667 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIMK1P53667 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.08□□□□□ -1.44
LIMK1P53667 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.08□□□□□ -1.44
LIMK1P53667 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 NEPNP-201ENST00000404786 1371 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC096921.2-201ENST00000561507 1916 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LIMK1P53667 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.07□□□□□ -1.44
LIMK1P53667 AL096711.1-201ENST00000404780 554 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 TMA16P2-201ENST00000413187 601 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 RPL35AP31-201ENST00000418340 337 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC007568.1-201ENST00000422912 471 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.07□□□□□ -1.44
LIMK1P53667 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 PPIAP10-201ENST00000438675 458 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 FTLP8-201ENST00000446770 267 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC016687.1-201ENST00000482574 353 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AC006499.3-201ENST00000506077 748 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.07□□□□□ -1.44
LIMK1P53667 BX510359.5-201ENST00000515651 304 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 SNORA70.20-201ENST00000516848 126 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 CDH12P4-201ENST00000517835 295 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 CDH12P3-201ENST00000517935 295 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 CDH12P1-201ENST00000518435 295 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.07□□□□□ -1.44
LIMK1P53667 IGHV3-57-201ENST00000520143 280 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.07□□□□□ -1.44
LIMK1P53667 AP001804.1-201ENST00000526868 919 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms