Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC5.97□□□□□ -1.45
BRCA2P51587 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 AP005403.1-201ENST00000579720 229 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC091932.2-201ENST00000623014 291 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC008785.1-201ENST00000624475 456 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 AL353763.1-201ENST00000624467 1628 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
BRCA2P51587 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BRCA2P51587 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BRCA2P51587 SNORA48.7-201ENST00000391302 135 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 GAPDHP25-201ENST00000447061 1001 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.97□□□□□ -1.45
BRCA2P51587 RN7SL352P-201ENST00000466002 277 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC091167.1-201ENST00000492017 396 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 COX6B1P5-201ENST00000509843 249 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
BRCA2P51587 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
BRCA2P51587 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 AC079741.1-201ENST00000321498 212 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 RN7SKP263-201ENST00000411194 309 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BRCA2P51587 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BRCA2P51587 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.96□□□□□ -1.45
BRCA2P51587 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.96□□□□□ -1.45
BRCA2P51587 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.96□□□□□ -1.45
BRCA2P51587 AL672138.1-201ENST00000450604 1015 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 AC063943.1-201ENST00000465434 453 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 RN7SKP253-201ENST00000516424 309 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.96□□□□□ -1.45
BRCA2P51587 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.96□□□□□ -1.45
BRCA2P51587 MIR4284-201ENST00000578924 81 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 AC011487.3-201ENST00000593607 453 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 THAP12P4-201ENST00000528321 2266 ntBASIC5.96□□□□□ -1.45
BRCA2P51587 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BRCA2P51587 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
BRCA2P51587 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 AC132825.3-201ENST00000562182 4710 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 NLRP3P1-201ENST00000622303 1785 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 EIF2S2P2-201ENST00000447161 982 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC074255.1-201ENST00000511259 501 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 EDDM3DP-201ENST00000554692 434 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC069366.1-201ENST00000583159 838 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 MIR4715-201ENST00000584117 79 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 CCDC58P3-201ENST00000590792 430 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BRCA2P51587 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 BNIP3P11-201ENST00000603878 563 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC005962.2-201ENST00000611427 652 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 AC010928.1-201ENST00000592477 1447 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BRCA2P51587 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRCA2P51587 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 RNA5SP326-201ENST00000363209 110 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 RNA5SP487-201ENST00000410186 122 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC073581.1-201ENST00000519036 575 ntBASIC5.96□□□□□ -1.46
BRCA2P51587 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
BRCA2P51587 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.96□□□□□ -1.46
BRCA2P51587 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.95□□□□□ -1.46
BRCA2P51587 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRCA2P51587 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRCA2P51587 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.95□□□□□ -1.46
BRCA2P51587 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRCA2P51587 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BRCA2P51587 AC009237.10-201ENST00000414112 510 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 AC009237.5-201ENST00000414271 501 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 AC009480.2-201ENST00000422916 432 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.95□□□□□ -1.46
BRCA2P51587 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.95□□□□□ -1.46
BRCA2P51587 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.95□□□□□ -1.46
BRCA2P51587 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 SCARNA9-201ENST00000530422 353 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRCA2P51587 AC099494.2-201ENST00000623371 978 ntBASIC5.95□□□□□ -1.46
BRCA2P51587 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRCA2P51587 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms