Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX2P48431 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 AC010132.2-201ENST00000295493 1043 ntBASIC5.47□□□□□ -1.53
SOX2P48431 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 RN7SKP28-201ENST00000364770 305 ntBASIC5.47□□□□□ -1.53
SOX2P48431 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
SOX2P48431 MRPS6P2-201ENST00000381143 370 ntBASIC5.47□□□□□ -1.53
SOX2P48431 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX2P48431 RNA5SP35-201ENST00000391257 129 ntBASIC5.47□□□□□ -1.53
SOX2P48431 RN7SKP129-201ENST00000410288 299 ntBASIC5.47□□□□□ -1.53
SOX2P48431 SSR1P2-201ENST00000415208 787 ntBASIC5.47□□□□□ -1.53
SOX2P48431 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 AC015977.1-201ENST00000418887 292 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX2P48431 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX2P48431 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 AC092106.2-201ENST00000436597 487 ntBASIC5.47□□□□□ -1.53
SOX2P48431 RPL6P5-201ENST00000445678 828 ntBASIC5.47□□□□□ -1.53
SOX2P48431 MTND2P8-201ENST00000450555 1025 ntBASIC5.47□□□□□ -1.53
SOX2P48431 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 RN7SKP198-201ENST00000459286 306 ntBASIC5.47□□□□□ -1.53
SOX2P48431 RPSAP39-201ENST00000467439 883 ntBASIC5.47□□□□□ -1.53
SOX2P48431 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 SUMO1P1-201ENST00000497904 306 ntBASIC5.47□□□□□ -1.53
SOX2P48431 SUMO2P5-201ENST00000506790 245 ntBASIC5.47□□□□□ -1.53
SOX2P48431 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX2P48431 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX2P48431 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 AC096661.1-201ENST00000515870 822 ntBASIC5.47□□□□□ -1.53
SOX2P48431 RN7SKP265-201ENST00000516448 223 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 MTND2P38-201ENST00000522536 667 ntBASIC5.47□□□□□ -1.53
SOX2P48431 RBMS2P1-201ENST00000525031 1226 ntBASIC5.47□□□□□ -1.53
SOX2P48431 NPM1P35-201ENST00000533043 868 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 AC005519.1-201ENST00000554490 601 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX2P48431 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX2P48431 NPIPB1P-202ENST00000588786 828 ntBASIC5.47□□□□□ -1.53
SOX2P48431 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
SOX2P48431 RPS4XP21-201ENST00000603814 750 ntBASIC5.47□□□□□ -1.53
SOX2P48431 OR7A19P-201ENST00000608051 733 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AL137000.1-201ENST00000610528 1244 ntBASIC5.47□□□□□ -1.53
SOX2P48431 AL669942.2-201ENST00000620352 697 ntBASIC5.47□□□□□ -1.53
SOX2P48431 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX2P48431 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX2P48431 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SOX2P48431 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.46□□□□□ -1.53
SOX2P48431 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SOX2P48431 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SOX2P48431 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
SOX2P48431 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX2P48431 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX2P48431 RNU6-468P-201ENST00000384003 109 ntBASIC5.46□□□□□ -1.54
SOX2P48431 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX2P48431 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 RPL22P22-201ENST00000395439 379 ntBASIC5.46□□□□□ -1.54
SOX2P48431 FDPSP5-201ENST00000399474 1057 ntBASIC5.46□□□□□ -1.54
SOX2P48431 NPM1P37-201ENST00000403105 874 ntBASIC5.46□□□□□ -1.54
SOX2P48431 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 FDPSP6-201ENST00000425091 512 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC092651.1-201ENST00000426110 312 ntBASIC5.46□□□□□ -1.54
SOX2P48431 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX2P48431 AL592114.2-201ENST00000440142 532 ntBASIC5.46□□□□□ -1.54
SOX2P48431 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX2P48431 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 RBMY2EP-202ENST00000456360 940 ntBASIC5.46□□□□□ -1.54
SOX2P48431 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX2P48431 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX2P48431 CYCSP20-201ENST00000473154 315 ntBASIC5.46□□□□□ -1.54
SOX2P48431 RN7SL714P-201ENST00000487050 298 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms