Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORA63C-201ENST00000364578 129 ntBASIC7.87□□□□□ -1.15
VARSP26640 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 SNORA30-201ENST00000384028 129 ntBASIC7.87□□□□□ -1.15
VARSP26640 RNU6-767P-201ENST00000384132 107 ntBASIC7.87□□□□□ -1.15
VARSP26640 RNU6-878P-201ENST00000384578 110 ntBASIC7.87□□□□□ -1.15
VARSP26640 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
VARSP26640 AC003080.1-201ENST00000413552 767 ntBASIC7.87□□□□□ -1.15
VARSP26640 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.87□□□□□ -1.15
VARSP26640 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 AL035410.1-201ENST00000427409 427 ntBASIC7.87□□□□□ -1.15
VARSP26640 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.87□□□□□ -1.15
VARSP26640 AL831737.1-201ENST00000441288 271 ntBASIC7.87□□□□□ -1.15
VARSP26640 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.87□□□□□ -1.15
VARSP26640 AC140076.1-201ENST00000449897 361 ntBASIC7.87□□□□□ -1.15
VARSP26640 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 KLRA1P-201ENST00000503499 986 ntBASIC7.87□□□□□ -1.15
VARSP26640 GAPDHP38-201ENST00000503632 1002 ntBASIC7.87□□□□□ -1.15
VARSP26640 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.87□□□□□ -1.15
VARSP26640 PIGFP1-201ENST00000519180 653 ntBASIC7.87□□□□□ -1.15
VARSP26640 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 AC107954.1-201ENST00000565906 727 ntBASIC7.87□□□□□ -1.15
VARSP26640 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.87□□□□□ -1.15
VARSP26640 AC093826.2-201ENST00000579042 108 ntBASIC7.87□□□□□ -1.15
VARSP26640 MIR4666A-201ENST00000580160 79 ntBASIC7.87□□□□□ -1.15
VARSP26640 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 AC006504.6-201ENST00000590142 199 ntBASIC7.87□□□□□ -1.15
VARSP26640 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 AC020914.6-201ENST00000594327 272 ntBASIC7.87□□□□□ -1.15
VARSP26640 TAS2R6P-201ENST00000605022 826 ntBASIC7.87□□□□□ -1.15
VARSP26640 MIR6726-201ENST00000613751 61 ntBASIC7.87□□□□□ -1.15
VARSP26640 MED15P6-202ENST00000621415 787 ntBASIC7.87□□□□□ -1.15
VARSP26640 AL136967.1-201ENST00000625120 441 ntBASIC7.87□□□□□ -1.15
VARSP26640 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 CRYM-AS1-204ENST00000637983 556 ntBASIC7.87□□□□□ -1.15
VARSP26640 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 AC008498.2-201ENST00000624033 2322 ntBASIC7.87□□□□□ -1.15
VARSP26640 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 AC145138.1-201ENST00000512908 2851 ntBASIC7.87□□□□□ -1.15
VARSP26640 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.87□□□□□ -1.15
VARSP26640 SALL4P7-201ENST00000555779 3120 ntBASIC7.87□□□□□ -1.15
VARSP26640 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
VARSP26640 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 AC241584.2-201ENST00000637142 2090 ntBASIC7.87□□□□□ -1.15
VARSP26640 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.86□□□□□ -1.15
VARSP26640 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
VARSP26640 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VARSP26640 RNU6-845P-201ENST00000362578 103 ntBASIC7.86□□□□□ -1.15
VARSP26640 LARP1P1-201ENST00000407692 292 ntBASIC7.86□□□□□ -1.15
VARSP26640 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 RPL26P29-201ENST00000415623 438 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC019181.1-201ENST00000417151 310 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.86□□□□□ -1.15
VARSP26640 AC008155.1-201ENST00000421078 329 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.86□□□□□ -1.15
VARSP26640 HMGN2P24-201ENST00000433516 273 ntBASIC7.86□□□□□ -1.15
VARSP26640 BX842559.2-201ENST00000451418 605 ntBASIC7.86□□□□□ -1.15
VARSP26640 AL591438.2-201ENST00000452635 691 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC093166.4-201ENST00000457867 318 ntBASIC7.86□□□□□ -1.15
VARSP26640 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 AC108688.1-201ENST00000485817 713 ntBASIC7.86□□□□□ -1.15
VARSP26640 MYADML-203ENST00000491596 951 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.86□□□□□ -1.15
VARSP26640 NPM1P27-201ENST00000502784 830 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.86□□□□□ -1.15
VARSP26640 GAPDHP31-201ENST00000509325 1014 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC109811.2-201ENST00000509609 452 ntBASIC7.86□□□□□ -1.15
VARSP26640 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.86□□□□□ -1.15
VARSP26640 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.86□□□□□ -1.15
VARSP26640 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.86□□□□□ -1.15
VARSP26640 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.86□□□□□ -1.15
VARSP26640 AC011712.1-201ENST00000588959 234 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.86□□□□□ -1.15
VARSP26640 SLC6A21P-201ENST00000599458 369 ntBASIC7.86□□□□□ -1.15
VARSP26640 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms